RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 IWS1Q96ST2 819 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 VGLL1Q99990 258 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 RBM4BQ9BQ04 359 aaKnown RBP3.21□□□□□ -1.9
CD46-217ENST00000493796 CABLES2Q9BTV7 478 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 CLEC7AQ9BXN2 247 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 MRPL1Q9BYD6 325 aaKnown RBP3.21□□□□□ -1.9
CD46-217ENST00000493796 FGFBP2Q9BYJ0 223 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 CPVLQ9H3G5 476 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 MYOZ2Q9NPC6 264 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 EQTNQ9NQ60 294 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 SLC35C2Q9NQQ7 365 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 GRID1Q9ULK0 1009 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 DDX49Q9Y6V7 483 aaKnown RBP3.21□□□□□ -1.9
CD46-217ENST00000493796 TCHHQ07283 1943 aa3.21□□□□□ -1.9
CD46-217ENST00000493796 MROH7-TTC4A0A0A0MT08 1334 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 NEDD4P46934 1319 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 MCM3APO60318 1980 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 CASP8AP2Q9UKL3 1982 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 GPAA1O43292 621 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 PRDM1O75626 825 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 IDH1O75874 414 aaKnown RBP3.2□□□□□ -1.9
CD46-217ENST00000493796 DANCRP0C864 163 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 HSPD1P10809 573 aaKnown RBP3.2□□□□□ -1.9
CD46-217ENST00000493796 HSPA8P11142 646 aaKnown RBP3.2□□□□□ -1.9
CD46-217ENST00000493796 EPHX2P34913 555 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
CD46-217ENST00000493796 BTDP43251 543 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 CDH13P55290 713 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 MAZP56270 477 aaKnown RBP3.2□□□□□ -1.9
CD46-217ENST00000493796 HAND2P61296 217 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 STK4Q13043 487 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 XKR3Q5GH77 459 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 MZT2BQ6NZ67 158 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 CHST3Q7LGC8 479 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 NUDT13Q86X67 352 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 ZNF595Q8IYB9 648 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 EID3Q8N140 333 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 GPC2Q8N158 579 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 NIPA2Q8N8Q9 360 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 APPL2Q8NEU8 664 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 OR10S1Q8NGN2 331 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 ACER1Q8TDN7 264 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 ZNRF4Q8WWF5 429 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 SPACA9Q96E40 222 aaPredicted RBP3.2□□□□□ -1.9
CD46-217ENST00000493796 C18orf12Q96KH6 178 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 RAD9AQ99638 391 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 EGFL8Q99944 293 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 PYGO2Q9BRQ0 406 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 LRRC2Q9BYS8 371 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 UBXN6Q9BZV1 441 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 WNT5BQ9H1J7 359 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 Q9N2K0 584 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 PDE7BQ9NP56 450 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.2□□□□□ -1.96e-6■■■■□ 22.2
CD46-217ENST00000493796 P4HTMQ9NXG6 502 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 DPP3Q9NY33 737 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 ERAP1Q9NZ08 941 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 BCCIPQ9P287 314 aaKnown RBP eCLIP3.2□□□□□ -1.9
CD46-217ENST00000493796 CRNNQ9UBG3 495 aaPredicted RBP3.2□□□□□ -1.9
CD46-217ENST00000493796 EPHA6Q9UF33 1036 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 PCDHGB4Q9UN71 923 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 TMEM5Q9Y2B1 443 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 WDR37Q9Y2I8 494 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 MYH6P13533 1939 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 LOC285556D6RIA3 1793 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 MGAMO43451 1857 aa3.2□□□□□ -1.9
CD46-217ENST00000493796 TTC41PQ6P2S7 1318 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 LAMA3Q16787 3333 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 IGKV6D-41A0A0C4DH26 115 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 A0A1B0GVY2 172 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 GLOD5A6NK44 160 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 A8MV72 311 aaPredicted RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 HMGB1P1B2RPK0 211 aaPredicted RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 MEIS2O14770 477 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 DUS4LO95620 317 aaKnown RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 AKR1B1P15121 316 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 SP100P23497 879 aaPredicted RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 DNASE1P24855 282 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 PTPN3P26045 913 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 MNDAP41218 407 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 MATR3P43243 847 aaKnown RBP eCLIP3.19□□□□□ -1.9
CD46-217ENST00000493796 GSDMDP57764 484 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 FKBP1AP62942 108 aaKnown RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 MAT1AQ00266 395 aaKnown RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 SQLEQ14534 574 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 MAPRE1Q15691 268 aaKnown RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 ODF4Q2M2E3 257 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 PDLIM3Q53GG5 364 aaPredicted RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 BMP2KLQ5H9B9 411 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 SLC25A53Q5H9E4 307 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 C12orf60Q5U649 245 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 SPATA1Q5VX52 437 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 FIP1L1Q6UN15 594 aaKnown RBP3.19□□□□□ -1.9
CD46-217ENST00000493796 IL27RAQ6UWB1 636 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 TMPRSS11BQ86T26 416 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 RTN4RL2Q86UN3 420 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 CDK20Q8IZL9 346 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 BMPERQ8N8U9 685 aa3.19□□□□□ -1.9
CD46-217ENST00000493796 SSMEM1Q8WWF3 244 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms