RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ASPGQ86U10 573 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 ISCA2Q86U28 154 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 RAB43Q86YS6 212 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 CENPLQ8N0S6 344 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 CAMKVQ8NCB2 501 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 ZNF740Q8NDX6 193 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 ZCCHC10Q8TBK6 192 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 DCAKDQ8WVC6 231 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 APOBEC4Q8WW27 367 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 SLC13A3Q8WWT9 602 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 CCT6BQ92526 530 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 THAP11Q96EK4 314 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 MMABQ96EY8 250 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 C10orf90Q96M02 699 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 AIF1LQ9BQI0 150 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 TMEM79Q9BSE2 394 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 SYNPO2LQ9H987 977 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 DNAJC11Q9NVH1 559 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 NUDT4Q9NZJ9 180 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 CPSF2Q9P2I0 782 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 ZNF180Q9UJW8 692 aa9.91□□□□□ -0.82
TRAPPC12-222ENST00000493792 TRBC2A0A5B9 178 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 ARGFXA6NJG6 315 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 SMIM23A6NLE4 172 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 SYCE1LA8MT33 242 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 TAPBPO15533 448 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 NDUFS4O43181 175 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 LCMT2O60294 686 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 KERAO60938 352 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 IPO13O94829 963 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 KLHL2O95198 593 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 MED26O95402 600 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 CAPN1P07384 714 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 C1GALT1C1LP0DN25 315 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 IL1RNP18510 177 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 GNAZP19086 355 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 VARSP26640 1264 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 AVPR1BP47901 424 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 KCNC1P48547 511 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 FOXL2P58012 376 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 RELAQ04206 551 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 OCA2Q04671 838 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 CDC16Q13042 620 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 PDK4Q16654 411 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 PFKFB4Q16877 469 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 UGT8Q16880 541 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 CDKL4Q5MAI5 379 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 GARNL3Q5VVW2 1013 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 PRMT9Q6P2P2 845 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 NXPE4Q6UWF7 544 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 OVCH1Q7RTY7 1134 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 VN1R4Q7Z5H5 301 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 EIF1ADQ8N9N8 165 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 MFSD9Q8NBP5 474 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 ABHD11Q8NFV4 315 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 FKBP10Q96AY3 582 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 DRC3Q9H069 523 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 SOX17Q9H6I2 414 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 ANKZF1Q9H8Y5 726 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 PELI2Q9HAT8 420 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 SLC22A11Q9NSA0 550 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 OPTCQ9UBM4 332 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 TRPC4Q9UBN4 977 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 CTSFQ9UBX1 484 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 TBK1Q9UHD2 729 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 MRPS2Q9Y399 296 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 ANGPTL3Q9Y5C1 460 aa9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 MDC1Q14676 2089 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-222ENST00000493792 CACNA1DQ01668 2161 aa9.9□□□□□ -0.83
TRAPPC12-222ENST00000493792 IQANK1A0A1B0GTG1 560 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 PEX12O00623 359 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 ITGAXP20702 1163 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 CXCR2P25025 360 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 TNFRSF8P28908 595 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 ARL1P40616 181 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 HNF4AP41235 474 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 SLCO1A2P46721 670 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 GCGRP47871 477 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 SLC6A12P48065 614 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 AGTR2P50052 363 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 EMP3P54852 163 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 REEP5Q00765 189 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 RGS1Q08116 209 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 CHAF1BQ13112 559 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 SLBPQ14493 270 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 ACAP2Q15057 778 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 XKR6Q5GH73 641 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 MFSD4BQ5TF39 518 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 MYLK4Q86YV6 388 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 KRT78Q8N1N4 520 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 PLD6Q8N2A8 252 aaKnown RBP9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 KCT2Q8NC54 265 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 PDPRQ8NCN5 879 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 OR9A4Q8NGU2 314 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 OR2Y1Q8NGV0 311 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 THAP4Q8WY91 577 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 MIEF2Q96C03 454 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 MTBPQ96DY7 904 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 ABHD17AQ96GS6 310 aa9.89□□□□□ -0.83
TRAPPC12-222ENST00000493792 ATOH8Q96SQ7 321 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms