RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 VN1R4Q7Z5H5 301 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 FGD2Q7Z6J4 655 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 SYCE1Q8N0S2 351 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 CPSF7Q8N684 471 aaKnown RBP16.61■□□□□ 0.25
NUP50-218ENST00000493456 PLPP5Q8NEB5 264 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 FAM57AQ8TBR7 257 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 FAM136AQ96C01 138 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 THAP11Q96EK4 314 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 OR1F2PQ96R84 312 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 TMUB1Q9BVT8 246 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 SLC24A3Q9HC58 644 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 ANKHQ9HCJ1 492 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 PAK5Q9P286 719 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 EPN1Q9Y6I3 576 aaPredicted RBP16.61■□□□□ 0.25
NUP50-218ENST00000493456 ANKHD1Q8IWZ3 2542 aaKnown RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 OR2W5A6NFC9 320 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 E5RI56 91 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 H7BY64 318 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 SGK494L7N484 410 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 AP3B1O00203 1094 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 CD99P14209 185 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 PTGER1P34995 402 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 PTGS2P35354 604 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 CYB561P49447 251 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 SESN2P58004 480 aaPredicted RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 SLC26A5P58743 744 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 RHAGQ02094 409 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 TFF3Q07654 80 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 TTLL9Q3SXZ7 439 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 CD163Q86VB7 1156 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 TMEM200AQ86VY9 491 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 RPS19BP1Q86WX3 136 aaKnown RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 DMRTC2Q8IXT2 367 aaPredicted RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 CAMKVQ8NCB2 501 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 TMEM125Q96AQ2 219 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 PRAP1Q96NZ9 151 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 FAM129AQ9BZQ8 928 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 CDCP1Q9H5V8 836 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 TRIM45Q9H8W5 580 aaPredicted RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 NPDC1Q9NQX5 325 aaPredicted RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 EIF2B3Q9NR50 452 aaKnown RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 ABCF3Q9NUQ8 709 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 TMEM184CQ9NVA4 438 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 KCNN3Q9UGI6 736 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 PACSIN2Q9UNF0 486 aaPredicted RBP16.6■□□□□ 0.25
NUP50-218ENST00000493456 ABCA2Q9BZC7 2435 aa16.6■□□□□ 0.25
NUP50-218ENST00000493456 MAGEB17A8MXT2 336 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 TFECO14948 347 aaPredicted RBP16.59■□□□□ 0.25
NUP50-218ENST00000493456 STATHP02808 62 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 TPOP07202 933 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 ARNTP27540 789 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 NMBRP28336 390 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 MSX1P28360 303 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 TPP2P29144 1249 aaPredicted RBP16.59■□□□□ 0.25
NUP50-218ENST00000493456 CRADDP78560 199 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 MPP1Q00013 466 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 KCNJ11Q14654 390 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 ZNF468Q5VIY5 522 aaPredicted RBP16.59■□□□□ 0.25
NUP50-218ENST00000493456 CES4AQ5XG92 561 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 LRRC56Q8IYG6 542 aaPredicted RBP16.59■□□□□ 0.25
NUP50-218ENST00000493456 SHISA5Q8N114 240 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 CCDC89Q8N998 374 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 LILRB4Q8NHJ6 448 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 ELP5Q8TE02 316 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 ZNF559Q9BR84 538 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 LACRTQ9GZZ8 138 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 BFARQ9NZS9 450 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 ZNF148Q9UQR1 794 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 DRG1Q9Y295 367 aaKnown RBP16.59■□□□□ 0.25
NUP50-218ENST00000493456 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
NUP50-218ENST00000493456 KLF13Q9Y2Y9 288 aaPredicted RBP16.59■□□□□ 0.25
NUP50-218ENST00000493456 NAV3Q8IVL0 2385 aa16.58■□□□□ 0.25
NUP50-218ENST00000493456 RDH16O75452 317 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 VAPBO95292 243 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 SYF2O95926 243 aaKnown RBP16.58■□□□□ 0.24
NUP50-218ENST00000493456 OGNP20774 298 aaKnown RBP16.58■□□□□ 0.24
NUP50-218ENST00000493456 DNAJA1P31689 397 aaKnown RBP16.58■□□□□ 0.24
NUP50-218ENST00000493456 TRHRP34981 398 aaPredicted RBP16.58■□□□□ 0.24
NUP50-218ENST00000493456 NPY2RP49146 381 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 OR4D2P58180 307 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 CEP128Q6ZU80 1094 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 MARVELD2Q8N4S9 558 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 CHDHQ8NE62 594 aaPredicted RBP16.58■□□□□ 0.24
NUP50-218ENST00000493456 ZCCHC10Q8TBK6 192 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 TM4SF19Q96DZ7 209 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 KIFC1Q9BW19 673 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 TP63Q9H3D4 680 aaPredicted RBP16.58■□□□□ 0.24
NUP50-218ENST00000493456 KCNJ16Q9NPI9 418 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 LANCL2Q9NS86 450 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 KLHL42Q9P2K6 505 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 GALPQ9UBC7 116 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 CRYL1Q9Y2S2 319 aa16.58■□□□□ 0.24
NUP50-218ENST00000493456 A0A1B0GTH9 108 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 FAM90A27PA6NNH2 459 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 KLRC4-KLRK1H3BQV0 150 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 ZBTB14O43829 449 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 CDC123O75794 336 aaPredicted RBP16.57■□□□□ 0.24
NUP50-218ENST00000493456 ETS1P14921 441 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 HOXB4P17483 251 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms