RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 FAM180AQ6UWF9 173 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 LCTLQ6UWM7 567 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 RIPOR1Q6ZS17 1223 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 LANCL3Q6ZV70 420 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 ASPGQ86U10 573 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 ANKMY2Q8IV38 441 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 CAMKVQ8NCB2 501 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 SLC13A3Q8WWT9 602 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 TM4SF19Q96DZ7 209 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 THAP11Q96EK4 314 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 WDR83Q9BRX9 315 aaKnown RBP16.32■□□□□ 0.2
SGMS1-204ENST00000492601 TRIM51Q9BSJ1 452 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 ANKHQ9HCJ1 492 aa16.32■□□□□ 0.2
SGMS1-204ENST00000492601 PABPN1LA6NDY0 278 aaKnown RBP16.31■□□□□ 0.2
SGMS1-204ENST00000492601 WIPF3A6NGB9 483 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 PCDH17O14917 1159 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 RDH16O75452 317 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 SEC24DO94855 1032 aaPredicted RBP16.31■□□□□ 0.2
SGMS1-204ENST00000492601 CLDN1O95832 211 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 GUCA1CO95843 209 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 EDN3P14138 238 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 TNFSF10P50591 281 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 DR1Q01658 176 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 GALNT7Q86SF2 657 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 PDSS2Q86YH6 399 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 MFSD9Q8NBP5 474 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 IMMP1LQ96LU5 166 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 CYTH2Q99418 400 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 OLFM1Q99784 485 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 HAUS8Q9BT25 410 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 TUBB6Q9BUF5 446 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.31■□□□□ 0.2
SGMS1-204ENST00000492601 OSGIN2Q9Y236 505 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 VWA7Q9Y334 891 aa16.31■□□□□ 0.2
SGMS1-204ENST00000492601 TRAV17A0A0B4J275 112 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 ZNF860A6NHJ4 632 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 OR1F1O43749 312 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 WDPCPO95876 746 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 SERPIND1P05546 499 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 SAT1P21673 171 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 CCR8P51685 355 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 ITGA8P53708 1063 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 GNG11P61952 73 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 ZNF33BQ06732 778 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 STEAP4Q687X5 459 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 DUPD1Q68J44 220 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 FAM45BPQ6NSW5 357 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 HIBCHQ6NVY1 386 aaPredicted RBP16.3■□□□□ 0.2
SGMS1-204ENST00000492601 RPUSD3Q6P087 351 aaKnown RBP16.3■□□□□ 0.2
SGMS1-204ENST00000492601 SYDE1Q6ZW31 735 aaPredicted RBP16.3■□□□□ 0.2
SGMS1-204ENST00000492601 CPEB2Q7Z5Q1 589 aaKnown RBP16.3■□□□□ 0.2
SGMS1-204ENST00000492601 CREG2Q8IUH2 290 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 BCORP1Q8N888 145 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 FAM45AQ8TCE6 357 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 HAS2Q92819 552 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 MOCOSQ96EN8 888 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 SNF8Q96H20 258 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 OR4K3Q96R72 315 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 RBCK1Q9BYM8 510 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 TRIM54Q9BYV2 358 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 TRIM31Q9BZY9 425 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 OLAHQ9NV23 265 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 IKZF3Q9UKT9 509 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 NAALAD2Q9Y3Q0 740 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 TEX264Q9Y6I9 313 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 GTF3C1Q12789 2109 aa16.3■□□□□ 0.2
SGMS1-204ENST00000492601 TTI1O43156 1089 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 NDUFS4O43181 175 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 LRRTM2O43300 516 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 SLC35G6P0C7Q6 338 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 ICAM2P13598 275 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 AP1S2P56377 157 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 ARL4CP56559 192 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 BTBD16Q32M84 506 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 ABHD17BQ5VST6 288 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 MAMDC2Q7Z304 686 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-204ENST00000492601 ANKRD37Q7Z713 158 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 ZNF740Q8NDX6 193 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 OR56A3Q8NH54 315 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 FBXL8Q96CD0 374 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 PEX11GQ96HA9 241 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 TAAR6Q96RI8 345 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 SLX1AQ9BQ83 275 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 C19orf25Q9UFG5 118 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-204ENST00000492601 CORO1CQ9ULV4 474 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-204ENST00000492601 PSAT1Q9Y617 370 aa16.29■□□□□ 0.2
SGMS1-204ENST00000492601 CREBBPQ92793 2442 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 A8MUI8 341 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 CDC123O75794 336 aaPredicted RBP16.28■□□□□ 0.2
SGMS1-204ENST00000492601 AP2B1P63010 937 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 SRSF11Q05519 484 aaKnown RBP16.28■□□□□ 0.2
SGMS1-204ENST00000492601 PDIA2Q13087 525 aaKnown RBP16.28■□□□□ 0.2
SGMS1-204ENST00000492601 CATSPEREQ5SY80 951 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 SBSNQ6UWP8 590 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 TMEM207Q6UWW9 146 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 ABHD11Q8NFV4 315 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 OR4K1Q8NGD4 311 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 OR5T3Q8NGG3 340 aa16.28■□□□□ 0.2
SGMS1-204ENST00000492601 LRRC39Q96DD0 335 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms