RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PTK6Q13882 451 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 MAPKAPK3Q16644 382 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 KCTD19Q17RG1 926 aaPredicted RBP12.42□□□□□ -0.42
USF1-206ENST00000491629 EMC4Q5J8M3 183 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 PCID2Q5JVF3 399 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 TMEM214Q6NUQ4 689 aaKnown RBP12.42□□□□□ -0.42
USF1-206ENST00000491629 CES3Q6UWW8 571 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 CEP128Q6ZU80 1094 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 PCGF5Q86SE9 256 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 CD163Q86VB7 1156 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
USF1-206ENST00000491629 KCT2Q8NC54 265 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 PLPP5Q8NEB5 264 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 PPHLN1Q8NEY8 458 aaKnown RBP12.42□□□□□ -0.42
USF1-206ENST00000491629 GIMAP7Q8NHV1 300 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 FAM57AQ8TBR7 257 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 ELP5Q8TE02 316 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 TM4SF19Q96DZ7 209 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 OLFM1Q99784 485 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 RBCK1Q9BYM8 510 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 CXXC4Q9H2H0 198 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 TRIM45Q9H8W5 580 aaPredicted RBP12.42□□□□□ -0.42
USF1-206ENST00000491629 ABCF3Q9NUQ8 709 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 C19orf25Q9UFG5 118 aaPredicted RBP12.42□□□□□ -0.42
USF1-206ENST00000491629 RNF6Q9Y252 685 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 MED16Q9Y2X0 877 aa12.42□□□□□ -0.42
USF1-206ENST00000491629 A0A1B0GTH9 108 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 SMAPO00193 183 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 PRRG2O14669 202 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 LIASO43766 372 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 LCMT2O60294 686 aaKnown RBP12.41□□□□□ -0.42
USF1-206ENST00000491629 RDH16O75452 317 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 CDC123O75794 336 aaPredicted RBP12.41□□□□□ -0.42
USF1-206ENST00000491629 GAS8O95995 478 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 IFNB1P01574 187 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 ZSCAN5DPP0CG00 497 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 CD99P14209 185 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 ZNF24P17028 368 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 TPP2P29144 1249 aaPredicted RBP12.41□□□□□ -0.42
USF1-206ENST00000491629 AGTR2P50052 363 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 CLCN7P51798 805 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
USF1-206ENST00000491629 SLC26A5P58743 744 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 ABRAXAS2Q15018 415 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 SPA17Q15506 151 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 EXT1Q16394 746 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 NDUFA9Q16795 377 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 TYSND1Q2T9J0 566 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 ADCK2Q7Z695 626 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 REXO1L1PQ8IX06 675 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 MPP5Q8N3R9 675 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 OR5T3Q8NGG3 340 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 LILRB4Q8NHJ6 448 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 MFSD3Q96ES6 412 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 RAB6BQ9NRW1 208 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 CRYL1Q9Y2S2 319 aa12.41□□□□□ -0.42
USF1-206ENST00000491629 EPN1Q9Y6I3 576 aaPredicted RBP12.41□□□□□ -0.42
USF1-206ENST00000491629 KCNE1BA0A087WTH5 132 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 FEZF1A0PJY2 475 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 ZNF860A6NHJ4 632 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 FAM90A27PA6NNH2 459 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 VAPBO95292 243 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 FTCDO95954 541 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 APRTP07741 180 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 IMPA1P29218 277 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 STIP1P31948 543 aaKnown RBP12.4□□□□□ -0.42
USF1-206ENST00000491629 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.42
USF1-206ENST00000491629 TERF1P54274 439 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 NAP1L1P55209 391 aaKnown RBP12.4□□□□□ -0.42
USF1-206ENST00000491629 ABATP80404 500 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 NSDHLQ15738 373 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 CMPK2Q5EBM0 449 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 RAD9BQ6WBX8 426 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 CYHR1Q6ZMK1 362 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 CENPUQ71F23 418 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 RPS19BP1Q86WX3 136 aaKnown RBP12.4□□□□□ -0.42
USF1-206ENST00000491629 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
USF1-206ENST00000491629 LGI4Q8N135 537 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 SLC5A8Q8N695 610 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 FBXO15Q8NCQ5 510 aaPredicted RBP12.4□□□□□ -0.42
USF1-206ENST00000491629 ACRBPQ8NEB7 543 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 ZCCHC10Q8TBK6 192 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 PEX11GQ96HA9 241 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 LIME1Q9H400 295 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 GSX1Q9H4S2 264 aaPredicted RBP12.4□□□□□ -0.42
USF1-206ENST00000491629 PLSCR2Q9NRY7 297 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 AMFRQ9UKV5 643 aa12.4□□□□□ -0.42
USF1-206ENST00000491629 E7EVH7 732 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 GFYI3L273 518 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 NDC80O14777 642 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 HS6ST1O60243 411 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 CCNDBP1O95273 360 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 B3GALT4O96024 378 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 CATP04040 527 aaKnown RBP12.39□□□□□ -0.43
USF1-206ENST00000491629 TPOP07202 933 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 HOXD4P09016 255 aaPredicted RBP12.39□□□□□ -0.43
USF1-206ENST00000491629 CHRM3P20309 590 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 RPL22P35268 128 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms