RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SLC5A6Q9Y289 635 aa8.41□□□□□ -1.06
HDAC3-211ENST00000491581 CACNA1DQ01668 2161 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 LOC102723996A0A087X1L8 192 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ARHGAP10A1A4S6 786 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 A8MUA0 341 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 CXorf49A8MYA2 514 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 OR1F1O43749 312 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 IPO13O94829 963 aaKnown RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 FKBP9O95302 570 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 IGHEP01854 428 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 SERPINA7P05543 415 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 UQCRHP07919 91 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 CD63P08962 238 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ZNF888P0CJ79 500 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 C8orf89P0DMQ9 161 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 CXCR2P25025 360 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 VARSP26640 1264 aaKnown RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 TSFMP43897 325 aaKnown RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ITGA8P53708 1063 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 RAB8AP61006 207 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 HSF1Q00613 529 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 HYAL2Q12891 473 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 BTBD16Q32M84 506 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 DEFB134Q4QY38 66 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 IRAK1BP1Q5VVH5 260 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 FAM219BQ5XKK7 198 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ZNF324BQ6AW86 544 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 CAPN13Q6MZZ7 669 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 SBSNQ6UWP8 590 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ASPGQ86U10 573 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 HPS6Q86YV9 775 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 CREG2Q8IUH2 290 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 CRLF3Q8IUI8 442 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ANKRD53Q8N9V6 530 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ST6GALNAC3Q8NDV1 305 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 TM9SF4Q92544 642 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 NEIL2Q969S2 332 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 ESAMQ96AP7 390 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 SLX1AQ9BQ83 275 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 FAM167BQ9BTA0 163 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 SGPP1Q9BX95 441 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 TGIF2Q9GZN2 237 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 RHBGQ9H310 441 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 GRPEL1Q9HAV7 217 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 MKKSQ9NPJ1 570 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-211ENST00000491581 LANCL2Q9NS86 450 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 OLAHQ9NV23 265 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 TMEM184CQ9NVA4 438 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 TEX264Q9Y6I9 313 aa8.4□□□□□ -1.06
HDAC3-211ENST00000491581 MAST4O15021 2626 aa8.4□□□□□ -1.07
HDAC3-211ENST00000491581 EML6Q6ZMW3 1958 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 MAGEB16A2A368 324 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 TGFBR3LH3BV60 316 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 PFDN6O15212 129 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 NDUFS4O43181 175 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 PRAMEF4O60810 478 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 B4GALT2O60909 372 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 WFS1O76024 890 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 UNC5CO95185 931 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 CCNDBP1O95273 360 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SNRPB2P08579 225 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 ENO3P13929 434 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 MAOAP21397 527 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 FDXRP22570 491 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 PPP2R1BP30154 601 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 FNTAP49354 379 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 HNRNPFP52597 415 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 TAS2R39P59534 338 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 ABATP80404 500 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 RHAGQ02094 409 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 PDAP1Q13442 181 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 ELOAQ14241 798 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 TLR1Q15399 786 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 TRADDQ15628 312 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SFT2D3Q587I9 215 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 UBAP2Q5T6F2 1119 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 PRAMEF9Q5VWM5 478 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SPINK14Q6IE38 97 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 FAM180AQ6UWF9 173 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 C16orf47Q6ZP98 133 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 CPEB2Q7Z5Q1 589 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 C17orf64Q86WR6 236 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SRRM1Q8IYB3 904 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 MYO1HQ8N1T3 1032 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 MFSD9Q8NBP5 474 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 TMEM52Q8NDY8 209 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SLC13A3Q8WWT9 602 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SNF8Q96H20 258 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 LIN28AQ9H9Z2 209 aaKnown RBP8.39□□□□□ -1.07
HDAC3-211ENST00000491581 PARVBQ9HBI1 364 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 AGPAT4Q9NRZ5 378 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 ARL15Q9NXU5 204 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 TAS2R13Q9NYV9 303 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 STMN3Q9NZ72 180 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 CDC14AQ9UNH5 594 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 SNX24Q9Y343 169 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 ASB1Q9Y576 335 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 MRFAP1Q9Y605 127 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms