RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 FAM60AQ9NP50 221 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 PFDN4Q9NQP4 134 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 SEMA5BQ9P283 1151 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 ANKDD1BA6NHY2 528 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 ZBTB11O95625 1053 aaPredicted RBP20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 AHRP35869 848 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 CYP4F2P78329 520 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 CLPPQ16740 277 aaPredicted RBP20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 GKAP1Q5VSY0 366 aaPredicted RBP20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 MFSD9Q8NBP5 474 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 TCTN2Q96GX1 697 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 DPYSL5Q9BPU6 564 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 BRF2Q9HAW0 419 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 DMRT3Q9NQL9 472 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 PDP2Q9P2J9 529 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 ADGRE2Q9UHX3 823 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 ZFP69BQ9UJL9 534 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 CCL27Q9Y4X3 112 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 SPTBN2O15020 2390 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 A0A0J9YVX5 310 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 GOLGA8QA0A0J9YX86 632 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 SERTM1A2A2V5 107 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 GOLGA8OA6NCC3 632 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 D6RAR5 112 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 GOLGA8NF8WBI6 632 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 FOXE1O00358 373 aaPredicted RBP20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 FTH1P19P0C7X4 201 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 GSTM2P28161 218 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 SERPINB1P30740 379 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 ARFIP2P53365 341 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 PHEXP78562 749 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 HMGCS1Q01581 520 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 CSTF3Q12996 717 aaKnown RBP20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 Q6ZSR9 355 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 SEC16BQ96JE7 1060 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 OR2A5Q96R48 311 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 PRM3Q9NNZ6 103 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 SOHLH2Q9NX45 425 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 AP1M2Q9Y6Q5 423 aa20.8■□□□□ 0.92
VCPKMT-204ENST00000491402 DCHS1Q96JQ0 3298 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 ADAMTS20P59510 1910 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 TOX3O15405 576 aaPredicted RBP20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 RFPL3O75679 317 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 HSD3B1P14060 373 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 HSD3B2P26439 372 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 RPS13P62277 151 aaKnown RBP20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 SPIDRQ14159 915 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 IMPG1Q17R60 797 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 GBP7Q8N8V2 638 aaPredicted RBP20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 OR52B2Q96RD2 323 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 CHRNA10Q9GZZ6 450 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 PPT2Q9UMR5 302 aa20.79■□□□□ 0.92
VCPKMT-204ENST00000491402 A8MU76 341 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 SLC28A1O00337 649 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 RGS14O43566 566 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 TBX6O95947 436 aaPredicted RBP20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 THRAP10827 490 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 MLLT3P42568 568 aaPredicted RBP20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 SEPHS1P49903 392 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 PUM1Q14671 1186 aaKnown RBP eCLIP20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 VN1R4Q7Z5H5 301 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 CREB3L4Q8TEY5 395 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 STON2Q8WXE9 905 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 TUBGCP3Q96CW5 907 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 ZNF768Q9H5H4 540 aaKnown RBP20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 PDE7BQ9NP56 450 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 TCF7L2Q9NQB0 619 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 RIC8BQ9NVN3 520 aa20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 COL27A1Q8IZC6 1860 aaPredicted RBP20.78■□□□□ 0.92
VCPKMT-204ENST00000491402 IGHV5-10-1A0A0J9YXX1 117 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 HCRTR1O43613 425 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 CLEC3AO75596 197 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 ETHE1O95571 254 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 TGFB1P01137 390 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 ILKQ13418 452 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 NR6A1Q15406 480 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 FRMPD2BQ6IN97 320 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 ACAD11Q709F0 780 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 TRPV3Q8NET8 790 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 WDR48Q8TAF3 677 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 THAP11Q96EK4 314 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 SLC41A2Q96JW4 573 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 AKTIPQ9H8T0 292 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 SLC12A4Q9UP95 1085 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 APOBEC2Q9Y235 224 aaKnown RBP20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 PCDHGA1Q9Y5H4 931 aa20.77■□□□□ 0.92
VCPKMT-204ENST00000491402 LSM1O15116 133 aaKnown RBP20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 NDUFS4O43181 175 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 MAP3K7O43318 606 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 VPS4BO75351 444 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 ANKRD34CP0C6C1 535 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 HSD11B2P80365 405 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 DEFB110Q30KQ9 67 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 LSM12Q3MHD2 195 aaKnown RBP20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 ZC3H12BQ5HYM0 836 aaKnown RBP20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 DHRS13Q6UX07 377 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 LARP4Q71RC2 724 aaKnown RBP eCLIP20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 KMT5CQ86Y97 462 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 SLITRK4Q8IW52 837 aa20.77■□□□□ 0.91
VCPKMT-204ENST00000491402 DNAJC22Q8N4W6 341 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms