RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 N4BP2L2Q92802 583 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 FCRL4Q96PJ5 515 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 SIKE1Q9BRV8 207 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 STRADBQ9C0K7 418 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 NSRP1Q9H0G5 558 aaKnown RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 FANCEQ9HB96 536 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 DMRT3Q9NQL9 472 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 AKAP7Q9P0M2 348 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-230ENST00000491028 USH1CQ9Y6N9 552 aa17.81■□□□□ 0.44
MCF2L-230ENST00000491028 GMNCA6NCL1 334 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 TRPC5OSA6NMA1 111 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 SKAP2O75563 359 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 KCNK5O95279 499 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 SLC35G6P0C7Q6 338 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 TROVE2P10155 538 aaKnown RBP eCLIP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 ALOX15P16050 662 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 DDX39BQ13838 428 aaKnown RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 ABRAXAS2Q15018 415 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 RSPO4Q2I0M5 234 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 ISXQ2M1V0 245 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 DEFB110Q30KQ9 67 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 HES3Q5TGS1 186 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 FRMPD2BQ6IN97 320 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 TRIM46Q7Z4K8 759 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 VN1R5Q7Z5H4 357 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 VN1R4Q7Z5H5 301 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 MCATQ8IVS2 390 aaKnown RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 CAMKVQ8NCB2 501 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 AGBL5Q8NDL9 886 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 NT5CQ8TCD5 201 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 CCT6BQ92526 530 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 TM4SF19Q96DZ7 209 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 C19orf60Q96EN9 201 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 ZNF285Q96NJ3 590 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 MTERF1Q99551 399 aaKnown RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 NLNQ9BYT8 704 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 PRM3Q9NNZ6 103 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 ENAMQ9NRM1 1142 aa17.8■□□□□ 0.44
MCF2L-230ENST00000491028 FARSBQ9NSD9 589 aaKnown RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 SIDT1Q9NXL6 827 aaKnown RBP17.8■□□□□ 0.44
MCF2L-230ENST00000491028 MAGEB17A8MXT2 336 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 H0YGG7 62 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 SLC28A1O00337 649 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 TXNDC9O14530 226 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 PIP5K1BO14986 540 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 SERPINA6P08185 405 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 NEK2P51955 445 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 ARF3P61204 181 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-230ENST00000491028 CYP4F2P78329 520 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 RGS1Q08116 209 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 PWP1Q13610 501 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 C16orf72Q14CZ0 275 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 PDCD2Q16342 344 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-230ENST00000491028 TCTE1Q5JU00 501 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 MANEAQ5SRI9 462 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 FAM219BQ5XKK7 198 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 ADNP2Q6IQ32 1131 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 DDIASQ8IXT1 998 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 CREB3L4Q8TEY5 395 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 SLC13A3Q8WWT9 602 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 MTFMTQ96DP5 389 aaKnown RBP17.79■□□□□ 0.44
MCF2L-230ENST00000491028 CMTM7Q96FZ5 175 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 LIN37Q96GY3 246 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-230ENST00000491028 SERPINI1Q99574 410 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 MS4A8Q9BY19 250 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 TRIM55Q9BYV6 548 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 TUBB1Q9H4B7 451 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 SYNPO2LQ9H987 977 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 MEAF6Q9HAF1 191 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 NMRK1Q9NWW6 199 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 CLCA2Q9UQC9 943 aa17.79■□□□□ 0.44
MCF2L-230ENST00000491028 ZSCAN9O15535 394 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-230ENST00000491028 NDUFS4O43181 175 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 RGS14O43566 566 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 CSO75390 466 aaKnown RBP17.78■□□□□ 0.44
MCF2L-230ENST00000491028 FOLR1P15328 257 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 PTX3P26022 381 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-230ENST00000491028 SEC24CP53992 1094 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 VSX2P58304 361 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-230ENST00000491028 STXBP1P61764 594 aaKnown RBP17.78■□□□□ 0.44
MCF2L-230ENST00000491028 RPS13P62277 151 aaKnown RBP17.78■□□□□ 0.44
MCF2L-230ENST00000491028 BTKQ06187 659 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 TUBB3Q13509 450 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 KCNAB1Q14722 419 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 IMPG1Q17R60 797 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 SGO1Q5FBB7 561 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 XKR7Q5GH72 579 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 CSNK1A1LQ8N752 337 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 OR8K5Q8NH50 307 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 STON2Q8WXE9 905 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 CMKLR1Q99788 373 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 NUF2Q9BZD4 464 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 SLC6A16Q9GZN6 736 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 FGF21Q9NSA1 209 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 RIC8BQ9NVN3 520 aa17.78■□□□□ 0.44
MCF2L-230ENST00000491028 LOC105369274A0A096LPK9 316 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 LOC102723532A0A0G2JNH3 316 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 URADA6NGE7 173 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 TMEM150CB9EJG8 249 aa17.77■□□□□ 0.44
MCF2L-230ENST00000491028 NPIPB8E9PQR5 432 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms