RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 NT5CQ8TCD5 201 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 ACTRT2Q8TDY3 377 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 ZNF473Q8WTR7 871 aaKnown RBP12.67□□□□□ -0.38
SNX12-205ENST00000490561 PPP3R2Q96LZ3 170 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 PPM1MQ96MI6 270 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 DEPDC7Q96QD5 511 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 OR2A5Q96R48 311 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 CCDC28BQ9BUN5 200 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 NUF2Q9BZD4 464 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 STRADBQ9C0K7 418 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 ENAMQ9NRM1 1142 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 AHSPQ9NZD4 102 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 TMEM9Q9P0T7 183 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 CDV3Q9UKY7 258 aaKnown RBP12.67□□□□□ -0.38
SNX12-205ENST00000490561 PCM1Q15154 2024 aa12.67□□□□□ -0.38
SNX12-205ENST00000490561 A0A0J9YVX5 310 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 ZNF195O14628 629 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 NDUFS4O43181 175 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 LCMT2O60294 686 aaKnown RBP12.66□□□□□ -0.38
SNX12-205ENST00000490561 CTSVO60911 334 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 CSTF2P33240 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNX12-205ENST00000490561 SEPHS1P49903 392 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 HTR6P50406 440 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 ARFIP2P53365 341 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 IRX1P78414 480 aaPredicted RBP12.66□□□□□ -0.38
SNX12-205ENST00000490561 CYP4F3Q08477 520 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 MAD2L1Q13257 205 aaPredicted RBP12.66□□□□□ -0.38
SNX12-205ENST00000490561 CUL3Q13618 768 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 DDX39BQ13838 428 aaKnown RBP12.66□□□□□ -0.38
SNX12-205ENST00000490561 ATP6AP1LQ52LC2 224 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 TCHHL1Q5QJ38 904 aaPredicted RBP12.66□□□□□ -0.38
SNX12-205ENST00000490561 PHF19Q5T6S3 580 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 NIPAL1Q6NVV3 410 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 PLD3Q8IV08 490 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 CACTIN-AS1Q8N1I8 211 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 ANKRD53Q8N9V6 530 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 AGBL5Q8NDL9 886 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 SLC13A3Q8WWT9 602 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 MAELQ96JY0 434 aaKnown RBP12.66□□□□□ -0.38
SNX12-205ENST00000490561 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 MTERF1Q99551 399 aaKnown RBP12.66□□□□□ -0.38
SNX12-205ENST00000490561 MS4A8Q9BY19 250 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 FAM107BQ9H098 131 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 KLHL25Q9H0H3 589 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 MRGBPQ9NV56 204 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 VPS29Q9UBQ0 182 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 TMED5Q9Y3A6 229 aa12.66□□□□□ -0.38
SNX12-205ENST00000490561 A0A088AWK7 358 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 A0A0G2JND7 137 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 A8MU76 341 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 MAGEB17A8MXT2 336 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 H0YGG7 62 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TM4SF5O14894 197 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 SNX3O60493 162 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 DIAPH2O60879 1101 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 DKK1O94907 266 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 LINC00032P0C843 101 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 ZNF10P21506 573 aaPredicted RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 MAPK1P28482 360 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TSFMP43897 325 aaKnown RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 NEK2P51955 445 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 EMP3P54852 163 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 ARF3P61204 181 aaPredicted RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 RPS13P62277 151 aaKnown RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 SKP1P63208 163 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 INSM1Q01101 510 aaPredicted RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 NR6A1Q15406 480 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 NDUFA9Q16795 377 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 SPIN4Q56A73 249 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 YOD1Q5VVQ6 348 aaPredicted RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 KHDRBS2Q5VWX1 349 aaKnown RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 CDCP2Q5VXM1 449 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 CGB2Q6NT52 195 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 PAGE2Q7Z2X7 111 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TMPRSS9Q7Z410 1059 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 VN1R5Q7Z5H4 357 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 VN1R4Q7Z5H5 301 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 CSNK1A1LQ8N752 337 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TTC29Q8NA56 475 aaPredicted RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 CEP70Q8NHQ1 597 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 CREB3L4Q8TEY5 395 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TUBGCP3Q96CW5 907 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 MTFMTQ96DP5 389 aaKnown RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 ZNF285Q96NJ3 590 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 QRFPRQ96P65 431 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 ELAC2Q9BQ52 826 aaKnown RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 ACPTQ9BZG2 426 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 ROGDIQ9GZN7 287 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TUBB1Q9H4B7 451 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 FAM60AQ9NP50 221 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TCF7L2Q9NQB0 619 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 C1orf109Q9NX04 203 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 TOR4AQ9NXH8 423 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 SLC12A4Q9UP95 1085 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms