RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ANK2Q01484 3957 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 A0A0G2JMM0 328 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 A0A1W2PPB8 328 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 A0A1W2PRS3 328 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 FEZF1A0PJY2 475 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 MBD3L4A6NDZ8 208 aaPredicted RBP12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 MBD3L5A6NJ08 208 aaPredicted RBP12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 IQCF5A8MTL0 148 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 KIR3DP1A8MWS1 328 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 SGK494L7N484 410 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 CLDN4O14493 209 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 DNAJB6O75190 326 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 CNOT4O95628 575 aaKnown RBP12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 KRT1P04264 644 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 IL1RNP18510 177 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 NR2C2P49116 596 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 UBE2HP62256 183 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 SPARCL1Q14515 664 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 NDUFA9Q16795 377 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 TTC23LQ6PF05 361 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 SEM1Q6ZVN7 128 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 TRILQ7L0X0 811 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 PLPP5Q8NEB5 264 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 ASZ1Q8WWH4 475 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 SECISBP2Q96T21 854 aaKnown RBP12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 C10orf88Q9H8K7 445 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 PCYOX1Q9UHG3 505 aa12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 TTC7AQ9ULT0 858 aaPredicted RBP12.75□□□□□ -0.37
EXOSC3-207ENST00000490516 DSCAMO60469 2012 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 A0A087X0T9 212 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 A0A1B0GVC2 190 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 HSPB2A8KAH6 182 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 FAM47E-STBD1D6RA91 191 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 ACOT7O00154 380 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 TXNDC9O14530 226 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 DVL2O14641 736 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 PHF2O75151 1096 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 C1orf105O95561 183 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 IGHG3P01860 377 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 TUBB4AP04350 444 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 CELA3AP09093 270 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 FAM228BP0C875 321 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 NAA25Q14CX7 972 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 HSPB2Q16082 182 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 SUSD1Q6UWL2 747 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 MFSD7Q6UXD7 560 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 BZW1Q7L1Q6 419 aaKnown RBP12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 PLD3Q8IV08 490 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 RAB42Q8N4Z0 105 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 TMEM156Q8N614 296 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 OR2M7Q8NG81 312 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 PIGTQ969N2 578 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 HAUS1Q96CS2 278 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 MACROD1Q9BQ69 325 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 TTTY12Q9BZ98 90 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 KCMF1Q9P0J7 381 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 FOXD3Q9UJU5 478 aaPredicted RBP12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 TRHDEQ9UKU6 1024 aa12.74□□□□□ -0.37
EXOSC3-207ENST00000490516 MAGEB17A8MXT2 336 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 G3V3Y1 287 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 AQP7O14520 342 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 CST8O60676 142 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 GOSR1O95249 250 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 APOA4P06727 396 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 TPH1P17752 444 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 PSMB4P28070 264 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 BCL6P41182 706 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 MAGEA5P43359 124 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 WNT3P56703 355 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 WLSQ5T9L3 541 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 ZNF425Q6IV72 752 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 POMZP3Q6PJE2 187 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 PCGF5Q86SE9 256 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 KIF18BQ86Y91 864 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 CYP4X1Q8N118 509 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 ARMC10Q8N2F6 343 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 PSD4Q8NDX1 1056 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 TNIP2Q8NFZ5 429 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 PEX11GQ96HA9 241 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 CCDC138Q96M89 665 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 QKIQ96PU8 341 aaKnown RBP eCLIP12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 TBL1YQ9BQ87 522 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 DEFB126Q9BYW3 111 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 TIMMDC1Q9NPL8 285 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 LANCL2Q9NS86 450 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 MTRF1LQ9UGC7 380 aaKnown RBP12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 DRG1Q9Y295 367 aaKnown RBP12.73□□□□□ -0.37
EXOSC3-207ENST00000490516 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 HAT1O14929 419 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 RDH16O75452 317 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 PKMP14618 531 aaKnown RBP12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 FOXN2P32314 431 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms