RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 IPO13O94829 963 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 KCNK2O95069 426 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SNAP29O95721 258 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CLIC3O95833 236 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CHEK2O96017 543 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NPPAP01160 153 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 KRT6AP02538 564 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TNNC2P02585 160 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 KRT6BP04259 564 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 FGF4P08620 206 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ALDOCP09972 364 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ITGAMP11215 1152 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CHRNB1P11230 501 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CDH1P12830 882 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 M6PRP20645 277 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 HRH2P25021 359 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PTPN3P26045 913 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PSMB4P28070 264 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CD6P30203 668 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SERPINB1P30740 379 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 HOXC8P31273 242 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 RYKP34925 604 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 RCVRNP35243 200 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 UGT2B10P36537 528 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NUDT1P36639 197 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DDOSTP39656 456 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ETV6P41212 452 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 YAP1P46937 504 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ZFP36L2P47974 494 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SERPINB10P48595 397 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 HCAR3P49019 387 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ALDH7A1P49419 539 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PGFP49763 221 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CLCNKBP51801 687 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 LIMK1P53667 647 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ATXN3P54252 364 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 RAD23AP54725 363 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ARSFP54793 590 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ARPP19P56211 112 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SNX16P57768 344 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 GNG2P59768 71 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 RAB10P61026 200 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CXCR4P61073 352 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 STX1BP61266 288 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ISL1P61371 349 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PITX1P78337 314 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CRADDP78560 199 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ECT2LQ008S8 904 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PRKCDQ05655 676 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SCAPQ12770 1279 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 FAPQ12884 760 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SEMA3BQ13214 749 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MRPL49Q13405 166 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 KRR1Q13601 381 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 RCAN2Q14206 197 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TOMM20Q15388 145 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SMAD1Q15797 465 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DGUOKQ16854 277 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CTU2Q2VPK5 515 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ADPRMQ3LIE5 342 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PYCR3Q53H96 274 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TECRLQ5HYJ1 363 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF667Q5HYK9 610 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 BRMS1LQ5PSV4 323 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 OTUD1Q5VV17 481 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF691Q5VV52 312 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TTC23Q5W5X9 447 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 METRNLQ641Q3 311 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SIGIRRQ6IA17 410 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CASC4Q6P4E1 433 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 FBXO46Q6PJ61 603 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC39A5Q6ZMH5 540 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ESPNLQ6ZVH7 1005 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 BEND5Q7L4P6 421 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 GET4Q7L5D6 327 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 STRADAQ7RTN6 431 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TAS1R1Q7RTX1 841 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PLPPR4Q7Z2D5 763 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PIWIL3Q7Z3Z3 882 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 R3HCC1LQ7Z5L2 792 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DSG4Q86SJ6 1040 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 RBM23Q86U06 439 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PIGZQ86VD9 579 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SERINC5Q86VE9 423 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC22A16Q86VW1 577 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 P2RY8Q86VZ1 359 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 LIX1LQ8IVB5 337 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC22A9Q8IVM8 553 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 IQCF2Q8IXL9 164 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CMIPQ8IY22 773 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DCP1BQ8IZD4 617 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 C8orf59Q8N0T1 100 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF567Q8N184 647 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ZCCHC7Q8N3Z6 543 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SVOPLQ8N434 492 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DPP10Q8N608 796 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 BPIFB6Q8NFQ5 453 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 OR7A2PQ8NGA2 310 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 WDR48Q8TAF3 677 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NDNFQ8TB73 568 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms