RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 KIAA1549Q9HCM3 1950 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 C5orf60A6NFR6 353 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 KDM4EB2RXH2 506 aaPredicted RBP13.97□□□□□ -0.17
UFD1-209ENST00000489406 G3V3Y1 287 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 P2RX6O15547 441 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 SUSD5O60279 629 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 CDC123O75794 336 aaPredicted RBP13.97□□□□□ -0.17
UFD1-209ENST00000489406 AGTP01019 485 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 FTH1P02794 183 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 RPN2P04844 631 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 ARHGAP25P42331 645 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 ZNF136P52737 540 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 PLOD1Q02809 727 aaPredicted RBP13.97□□□□□ -0.17
UFD1-209ENST00000489406 TYRO3Q06418 890 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 VEZF1Q14119 521 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 PDK1Q15118 436 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 NPNTQ6UXI9 565 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 PRSS41Q7RTY9 318 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 IRF2BP2Q7Z5L9 587 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 CPNE8Q86YQ8 564 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 FAM109AQ8N4B1 249 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 RNF157Q96PX1 679 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 ACAT2Q9BWD1 397 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 RBCK1Q9BYM8 510 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 DEFB126Q9BYW3 111 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 SPTLC3Q9NUV7 552 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 SPRR3Q9UBC9 169 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 IP6K2Q9UHH9 426 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 ERVK-11Q9UQG0 969 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 CR1P17927 2039 aa13.97□□□□□ -0.17
UFD1-209ENST00000489406 TRBV5-4A0A0C4DH59 114 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 KRT87PA6NCN2 255 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 H0YIG0 161 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 GLSO94925 669 aaPredicted RBP13.96□□□□□ -0.17
UFD1-209ENST00000489406 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 ENDOUP21128 410 aaKnown RBP13.96□□□□□ -0.17
UFD1-209ENST00000489406 ATP5J2P56134 94 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 RHAGQ02094 409 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 NDUFAF5Q5TEU4 345 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 C20orf204Q6ZNR8 217 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 VRK3Q8IV63 474 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 CYP4X1Q8N118 509 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 MLKLQ8NB16 471 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 PLPP5Q8NEB5 264 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 RERGQ96A58 199 aaPredicted RBP13.96□□□□□ -0.17
UFD1-209ENST00000489406 ZBED6CLQ96FA7 236 aaPredicted RBP13.96□□□□□ -0.17
UFD1-209ENST00000489406 OR2A5Q96R48 311 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 BEX2Q9BXY8 128 aa13.96□□□□□ -0.17
UFD1-209ENST00000489406 PPP1R12AO14974 1030 aaPredicted RBP13.95□□□□□ -0.18
UFD1-209ENST00000489406 SIAH2O43255 324 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 ITGA10O75578 1167 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 IL2RAP01589 272 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
UFD1-209ENST00000489406 CFPP27918 469 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 CMPK1P30085 196 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 SLC10A1Q14973 349 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 DBN1Q16643 649 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 NDUFA9Q16795 377 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 CLEC12BQ2HXU8 276 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 HYAL4Q2M3T9 481 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 ABHD13Q7L211 337 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 SLC22A15Q8IZD6 547 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 ARMC10Q8N2F6 343 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 OLFM3Q96PB7 478 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 RAB11FIP5Q9BXF6 653 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 FSD1LQ9BXM9 530 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
UFD1-209ENST00000489406 TRGV5A0A0B4J1U4 118 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 A0A0G2JK05 382 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 A0A1W2PPV9 198 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 MAGEB17A8MXT2 336 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 SGK494L7N484 410 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 TXNDC9O14530 226 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 NSA2O95478 260 aaKnown RBP13.94□□□□□ -0.18
UFD1-209ENST00000489406 EPPINO95925 133 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 MYBL1P10243 752 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 GZMAP12544 262 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 SOX18P35713 384 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 MPP1Q00013 466 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 HSPA14Q0VDF9 509 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 MPP3Q13368 585 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 SIX1Q15475 284 aaPredicted RBP13.94□□□□□ -0.18
UFD1-209ENST00000489406 PIANPQ8IYJ0 282 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 FBXW8Q8N3Y1 598 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 MCOLN3Q8TDD5 553 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 TRIM11Q96F44 468 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 PIK3IP1Q96FE7 263 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 RBM24Q9BX46 236 aaKnown RBP13.94□□□□□ -0.18
UFD1-209ENST00000489406 JKAMPQ9P055 326 aa13.94□□□□□ -0.18
UFD1-209ENST00000489406 CRTAMO95727 393 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 PAX1P15863 534 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 IL1RNP18510 177 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 TIMP3P35625 211 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 BCL6P41182 706 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 ZNF140P52738 457 aaPredicted RBP13.93□□□□□ -0.18
UFD1-209ENST00000489406 WASHC5Q12768 1159 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 CCSMST1Q4G0I0 132 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 UBAP2Q5T6F2 1119 aaKnown RBP13.93□□□□□ -0.18
UFD1-209ENST00000489406 HIST2H2BDQ6DRA6 164 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms