RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.57□□□□□ -1.045e-19■■■■■ 32
SSBP1-212ENST00000489378 ARHGAP21Q5T5U3 1957 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 A0A1W2PPV9 198 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 ARHGEF33A8MVX0 844 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 KLRC4-KLRK1H3BQV0 150 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 SLC16A5O15375 505 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 P2RX6O15547 441 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 PROSCO94903 275 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 CRTAMO95727 393 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 TRHRP34981 398 aaPredicted RBP8.57□□□□□ -1.04
SSBP1-212ENST00000489378 MLF1P58340 268 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 SLC26A5P58743 744 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 KRTAP1-1Q07627 177 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 KLHL30Q0D2K2 578 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 USP10Q14694 798 aaKnown RBP8.57□□□□□ -1.04
SSBP1-212ENST00000489378 POU4F3Q15319 338 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 CCSMST1Q4G0I0 132 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 KAZNQ674X7 775 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 RANBP10Q6VN20 620 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 APTXQ7Z2E3 356 aaKnown RBP8.57□□□□□ -1.04
SSBP1-212ENST00000489378 YTHDF3Q7Z739 585 aaKnown RBP8.57□□□□□ -1.04
SSBP1-212ENST00000489378 SLC22A15Q8IZD6 547 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 OR9A4Q8NGU2 314 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 RNASE6Q93091 150 aaKnown RBP8.57□□□□□ -1.04
SSBP1-212ENST00000489378 SPATA13Q96N96 652 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 DPH7Q9BTV6 452 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 PRM3Q9NNZ6 103 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 AIPL1Q9NZN9 384 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 LIPGQ9Y5X9 500 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 ABCA1O95477 2261 aa8.57□□□□□ -1.04
SSBP1-212ENST00000489378 PINLYPA6NC86 204 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 CLCA1A8K7I4 914 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 FAM166BA8MTA8 275 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 ZNF487B1APH4 448 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 CDK2AP1O14519 115 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 SMPD2O60906 423 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 STATHP02808 62 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 HRGP04196 525 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 CYC1P08574 325 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 PECAM1P16284 738 aaPredicted RBP8.56□□□□□ -1.04
SSBP1-212ENST00000489378 CCR7P32248 378 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 ADRA1AP35348 466 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 XCR1P46094 333 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 AGTR2P50052 363 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 PPIAP62937 165 aaKnown RBP8.56□□□□□ -1.04
SSBP1-212ENST00000489378 ACTN3Q08043 901 aaPredicted RBP8.56□□□□□ -1.04
SSBP1-212ENST00000489378 FILIP1LQ4L180 1135 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 GARNL3Q5VVW2 1013 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 PODNL1Q6PEZ8 512 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 PRSS41Q7RTY9 318 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 MDGA2Q7Z553 956 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 RFX6Q8HWS3 928 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 LINC01560Q8TB33 94 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 ELP5Q8TE02 316 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 TFB1MQ8WVM0 346 aaKnown RBP8.56□□□□□ -1.04
SSBP1-212ENST00000489378 SMC6Q96SB8 1091 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 LPAR4Q99677 370 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 CNPPD1Q9BV87 410 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 MAK16Q9BXY0 300 aaKnown RBP8.56□□□□□ -1.04
SSBP1-212ENST00000489378 DEPPQ9NTK1 212 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 HCN3Q9P1Z3 774 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 RSPH14Q9UHP6 348 aa8.56□□□□□ -1.04
SSBP1-212ENST00000489378 TUBAL3A6NHL2 446 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 A6NJY4 79 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 BCKDKO14874 412 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 RPN2P04844 631 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 BMP7P18075 431 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 CD33P20138 364 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 BDKRB1P46663 353 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 AVPR1BP47901 424 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 ASCL1P50553 236 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 PLOD1Q02809 727 aaPredicted RBP8.55□□□□□ -1.04
SSBP1-212ENST00000489378 HSPA14Q0VDF9 509 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 PTK6Q13882 451 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 FAM53BQ14153 422 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 ABRAXAS2Q15018 415 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 CT47A1Q5JQC4 288 aaPredicted RBP8.55□□□□□ -1.04
SSBP1-212ENST00000489378 C1orf185Q5T7R7 199 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 RIPPLY2Q5TAB7 128 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 PAOXQ6QHF9 649 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 PRSS57Q6UWY2 283 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 OR51Q1Q8NH59 317 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 LKAAEAR1Q8TD35 194 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 CREB3L4Q8TEY5 395 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 TSLPQ969D9 159 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 MRRFQ96E11 262 aaKnown RBP8.55□□□□□ -1.04
SSBP1-212ENST00000489378 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 OR2A5Q96R48 311 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 ACAT2Q9BWD1 397 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 ZDHHC11Q9H8X9 412 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 B4GALT7Q9UBV7 327 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 KIAA1549Q9HCM3 1950 aa8.55□□□□□ -1.04
SSBP1-212ENST00000489378 IGKV1-8A0A0C4DH67 115 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 A0A0G2JMM0 328 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 A0A1W2PPB8 328 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 A0A1W2PRS3 328 aa8.54□□□□□ -1.04
SSBP1-212ENST00000489378 OR14I1A6ND48 311 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms