RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 KRT23Q9C075 422 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 OR2B2Q9GZK3 357 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 SHARPINQ9H0F6 387 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 TSPYL1Q9H0U9 437 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 NAPBQ9H115 298 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 RAVER2Q9HCJ3 691 aaKnown RBP3.9□□□□□ -1.79
XRN1-213ENST00000489241 DONSONQ9NYP3 566 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 EPS15L1Q9UBC2 864 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 TRIM10Q9UDY6 481 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 KCNG2Q9UJ96 466 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 ICAM5Q9UMF0 924 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 AGTPBP1Q9UPW5 1226 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 IL16Q14005 1332 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 ANTXRLA6NF34 631 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 H3BMM5 538 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 TXNL1O43396 289 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 SCO2O43819 266 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 NR3C1P04150 777 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 DARSP14868 501 aaKnown RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 GOT1P17174 413 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 HPDP32754 393 aaPredicted RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 SFTPDP35247 375 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 FKBP1BP68106 108 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 GALK2Q01415 458 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 ILF3Q12906 894 aaKnown RBP eCLIP3.89□□□□□ -1.79
XRN1-213ENST00000489241 DMP1Q13316 513 aaPredicted RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 ACKR1Q16570 336 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 MFSD7Q6UXD7 560 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 ISLR2Q6UXK2 745 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 MARK2Q7KZI7 788 aaKnown RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 CPEB2Q7Z5Q1 589 aaKnown RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 PRUNE1Q86TP1 453 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 NR2C2APQ86WQ0 139 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 ZNF843Q8N446 348 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 LRTM2Q8N967 370 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 KBTBD3Q8NAB2 608 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 EXOC6Q8TAG9 804 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 RFT1Q96AA3 541 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 TMEM186Q96B77 213 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 ZNF583Q96ND8 569 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 FAM111AQ96PZ2 611 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 DDX50Q9BQ39 737 aaKnown RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 PSD2Q9BQI7 771 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 TRMT61BQ9BVS5 477 aaKnown RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 CARD9Q9H257 536 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 C5orf66Q9H5L9 145 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 UPF2Q9HAU5 1272 aaKnown RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 KCNMB3Q9NPA1 279 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 CHST11Q9NPF2 352 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 FAM118AQ9NWS6 357 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 MDFICQ9P1T7 246 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 ACTR3BQ9P1U1 418 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 SPASTQ9UBP0 616 aa3.89□□□□□ -1.79
XRN1-213ENST00000489241 FOXA2Q9Y261 457 aaPredicted RBP3.89□□□□□ -1.79
XRN1-213ENST00000489241 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 TRBV5-5A0A0J9YX44 114 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 TMEM129A0AVI4 362 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 E5RGE8 158 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 ATP6V0E1O15342 81 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 FGF17O60258 216 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 PRKNO60260 465 aaPredicted RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 PRDM1O75626 825 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 FRMD6-AS1P0C7T7 363 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 ETS1P14921 441 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 DESP17661 470 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 UGT1A6P19224 532 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 LHCGRP22888 699 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 CA6P23280 308 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 ALDH4A1P30038 563 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 SRD5A2P31213 254 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 GPC3P51654 580 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 POLR2FP61218 127 aaKnown RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 GAMTQ14353 236 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 SQLEQ14534 574 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 OPCMLQ14982 345 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 ZC2HC1CQ53FD0 456 aaPredicted RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 ZNF542PQ5EBM4 170 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 SLC25A53Q5H9E4 307 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 NEK5Q6P3R8 708 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 CCDC60Q8IWA6 550 aaPredicted RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 RCOR2Q8IZ40 523 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 ELMOD2Q8IZ81 293 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 BATF2Q8N1L9 274 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 PRSS35Q8N3Z0 413 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 CCNYQ8ND76 341 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 PIK3R3Q92569 461 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 GGHQ92820 318 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 MRPL38Q96DV4 380 aaKnown RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 NSL1Q96IY1 281 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 INPP4AQ96PE3 977 aaPredicted RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 RHNO1Q9BSD3 238 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 ZNF577Q9BSK1 485 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 TEX13AQ9BXU3 409 aaPredicted RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 MTMR12Q9C0I1 747 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 WWTR1Q9GZV5 400 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 CPVLQ9H3G5 476 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 TFB2MQ9H5Q4 396 aaKnown RBP3.88□□□□□ -1.79
XRN1-213ENST00000489241 RNF121Q9H920 327 aa3.88□□□□□ -1.79
XRN1-213ENST00000489241 ZCCHC3Q9NUD5 404 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms