RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PDGFRAP16234 1089 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 OXTRP30559 389 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 RGS7P49802 495 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 ZNF41P51814 821 aaPredicted RBP3.35□□□□□ -1.87
SSR1-209ENST00000488834 CAPZA1P52907 286 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 IRX4P78413 519 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 NFATC2Q13469 925 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 ZNF273Q14593 569 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 UGCGQ16739 394 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 SNAI3Q3KNW1 292 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 FAM174BQ3ZCQ3 159 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 ATP1A1-AS1Q5TC04 95 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 OR4C11Q6IEV9 310 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 IL17RELQ6ZVW7 336 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 DNAJB7Q7Z6W7 309 aaPredicted RBP3.35□□□□□ -1.87
SSR1-209ENST00000488834 ANKRD23Q86SG2 305 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 PHLDB2Q86SQ0 1253 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 P2RY8Q86VZ1 359 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 FAM219AQ8IW50 185 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 SETD6Q8TBK2 473 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 NSMAFQ92636 917 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 SLC45A3Q96JT2 553 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 AK8Q96MA6 479 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 ZMAT2Q96NC0 199 aaKnown RBP3.35□□□□□ -1.87
SSR1-209ENST00000488834 LGMNQ99538 433 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 NDNQ99608 321 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 MGME1Q9BQP7 344 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 ST6GALNAC4Q9H4F1 302 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 RAVER2Q9HCJ3 691 aaKnown RBP3.35□□□□□ -1.87
SSR1-209ENST00000488834 GPN1Q9HCN4 374 aaPredicted RBP3.35□□□□□ -1.87
SSR1-209ENST00000488834 BAIAP2L1Q9UHR4 511 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 SMAD5-AS1Q9Y6J3 95 aa3.35□□□□□ -1.87
SSR1-209ENST00000488834 IQCMA0A1B0GVH7 501 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 A8MVM7 634 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 F8VVB4 439 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 F8VWA3 439 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 CEACAM4O75871 244 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 PGLSO95336 258 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 HSPA4LO95757 839 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 HPRP00739 348 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 PTMAP06454 111 aaKnown RBP3.34□□□□□ -1.87
SSR1-209ENST00000488834 YES1P07947 543 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 SPP1P10451 314 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 SSTR1P30872 391 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 CAPGP40121 348 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 IL10RBQ08334 325 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 C6orf136Q5SQH8 315 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 PRSS55Q6UWB4 352 aaPredicted RBP3.34□□□□□ -1.87
SSR1-209ENST00000488834 MACC1Q6ZN28 852 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 DZIP1Q86YF9 867 aaKnown RBP3.34□□□□□ -1.87
SSR1-209ENST00000488834 THNSL1Q8IYQ7 743 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 OR2L2Q8NH16 312 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 MIPOL1Q8TD10 442 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 CNRIP1Q96F85 164 aaPredicted RBP3.34□□□□□ -1.87
SSR1-209ENST00000488834 PRICKLE1Q96MT3 831 aaPredicted RBP3.34□□□□□ -1.87
SSR1-209ENST00000488834 ZCCHC17Q9NP64 241 aaKnown RBP3.34□□□□□ -1.87
SSR1-209ENST00000488834 NLGN3Q9NZ94 848 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 POLKQ9UBT6 870 aa3.34□□□□□ -1.87
SSR1-209ENST00000488834 RUVBL2Q9Y230 463 aaKnown RBP3.34□□□□□ -1.87
SSR1-209ENST00000488834 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 A8MXK9 166 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 TMEM150CB9EJG8 249 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 E5RGE8 158 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 CCDC188H7C350 402 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 WDR46O15213 610 aaKnown RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 SCG2P13521 617 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 AOC1P19801 751 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 RBMS1P29558 406 aaKnown RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 CRKLP46109 303 aaKnown RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 NPY4RP50391 375 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 MFAP3P55082 362 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 CLDN17P56750 224 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 ZNF177Q13360 481 aaPredicted RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 CDC37Q16543 378 aaPredicted RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 DUSP5Q16690 384 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 SHQ1Q6PI26 577 aaKnown RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 PET117Q6UWS5 81 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 FAM47EQ6ZV65 393 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 GPRIN3Q6ZVF9 776 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 ABI3BPQ7Z7G0 1075 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 METTL23Q86XA0 190 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 PRSS35Q8N3Z0 413 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 RPLP0P6Q8NHW5 317 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 RASL10AQ92737 203 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 P2RX5Q93086 422 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 NXPE2Q96DL1 559 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 GDAP1L1Q96MZ0 367 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 NEDD4LQ96PU5 975 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 GAL3ST4Q96RP7 486 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 IL12RB2Q99665 862 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 NACAP1Q9BZK3 213 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 EDEM3Q9BZQ6 932 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 RPF1Q9H9Y2 349 aaKnown RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 C3orf14Q9HBI5 128 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 SH3GLB2Q9NR46 395 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 EXOC1Q9NV70 894 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 KLK13Q9UKR3 277 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 POMT2Q9UKY4 750 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 NAP1L2Q9ULW6 460 aaPredicted RBP3.33□□□□□ -1.88
SSR1-209ENST00000488834 PLCL2Q9UPR0 1127 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms