RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZNF71Q9NQZ8 489 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 FAM207AQ9NSI2 230 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 BCCIPQ9P287 314 aaKnown RBP eCLIP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 LRWD1Q9UFC0 647 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 TUBE1Q9UJT0 475 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 EXOGQ9Y2C4 368 aaKnown RBP3.84□□□□□ -1.79
ITGB1-214ENST00000488427 PRSS21Q9Y6M0 314 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 TONSLQ96HA7 1378 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 SNED1Q8TER0 1413 aa3.84□□□□□ -1.79
ITGB1-214ENST00000488427 MYO18BQ8IUG5 2567 aa3.84□□□□□ -1.8
ITGB1-214ENST00000488427 HELZ2Q9BYK8 2649 aaKnown RBP3.84□□□□□ -1.8
ITGB1-214ENST00000488427 A0A0G2JMZ2 1700 aa3.84□□□□□ -1.8
ITGB1-214ENST00000488427 MAST2Q6P0Q8 1798 aa3.84□□□□□ -1.8
ITGB1-214ENST00000488427 WDR87Q6ZQQ6 2873 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 TMEM221A6NGB7 291 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 ARPC2O15144 300 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 PPIP5K2O43314 1243 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 ADAM20O43506 726 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 NXPH2O95156 264 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 PRKAR1AP10644 381 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 PRMT2P55345 433 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 GSDMDP57764 484 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 IFI35P80217 286 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-214ENST00000488427 CUL3Q13618 768 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 BECN1Q14457 450 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 IL11RAQ14626 422 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 LETM2Q2VYF4 491 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 CRY2Q49AN0 593 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 SYT14P1Q58G82 188 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 BSPRYQ5W0U4 402 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 CST9LP1Q5W188 147 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 LYSMD4Q5XG99 296 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 PWWP2BQ6NUJ5 590 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 MOB2Q70IA6 237 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 BMPERQ8N8U9 685 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 NOA1Q8NC60 698 aaKnown RBP3.83□□□□□ -1.8
ITGB1-214ENST00000488427 GPRC5AQ8NFJ5 357 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 ZNF653Q96CK0 615 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 P4HTMQ9NXG6 502 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 KLHL8Q9P2G9 620 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-214ENST00000488427 DAPK2Q9UIK4 370 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 STUB1Q9UNE7 303 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 WDR37Q9Y2I8 494 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 RIPK3Q9Y572 518 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 RIC1Q4ADV7 1423 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 KMT2EQ8IZD2 1858 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 GBF1Q92538 1859 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 DOCK3Q8IZD9 2030 aa3.83□□□□□ -1.8
ITGB1-214ENST00000488427 PRRC2BQ5JSZ5 2229 aaKnown RBP3.83□□□□□ -1.8
ITGB1-214ENST00000488427 XIRP2A4UGR9 3374 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 DOPEY1Q5JWR5 2465 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 EP300Q09472 2414 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-214ENST00000488427 IGLV7-46A0A075B6I9 117 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 ENO4A6NNW6 628 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 CLDN4O14493 209 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 CDK2AP2O75956 126 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 FYNP06241 537 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 LDHCP07864 332 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 HAPLN1P10915 354 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-214ENST00000488427 KRT5P13647 590 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 MAT1AQ00266 395 aaKnown RBP3.82□□□□□ -1.8
ITGB1-214ENST00000488427 AIMP1Q12904 312 aaKnown RBP3.82□□□□□ -1.8
ITGB1-214ENST00000488427 RALGDSQ12967 914 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 TNIP1Q15025 636 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 TCP11X2Q5H9J9 407 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 ADAMTSL4-AS1Q5T5F5 129 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 C6orf163Q5TEZ5 329 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 FBXL22Q6P050 247 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 ARHGAP22Q7Z5H3 698 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 CENPVQ7Z7K6 275 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-214ENST00000488427 KIRREL3Q8IZU9 778 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 EID3Q8N140 333 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 ZNF614Q8N883 585 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 OR10G8Q8NGN5 311 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 OR2T11Q8NH01 316 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 OR2T6Q8NHC8 308 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 NKX3-1Q99801 234 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-214ENST00000488427 ZMYND12Q9H0C1 365 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 GOLPH3LQ9H4A5 285 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 RABEP2Q9H5N1 569 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 OLAHQ9NV23 265 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 NKIRAS2Q9NYR9 191 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 RNF215Q9Y6U7 377 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 AK9Q5TCS8 1911 aa3.82□□□□□ -1.8
ITGB1-214ENST00000488427 DMXL1Q9Y485 3027 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 PTPN13Q12923 2485 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 KTN1Q86UP2 1357 aaKnown RBP3.81□□□□□ -1.8
ITGB1-214ENST00000488427 A0A1W2PPQ1 181 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 NTN3O00634 580 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-214ENST00000488427 DCXO43602 365 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 KRT33AO76009 404 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 ZNF883P0CG24 379 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 AKR1B1P15121 316 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 ALDH1B1P30837 517 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 RAD52P43351 418 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 SLC6A12P48065 614 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 LIMK1P53667 647 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 MAPK12P53778 367 aa3.81□□□□□ -1.8
ITGB1-214ENST00000488427 ITGA7Q13683 1181 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms