RNA–Protein interactions for RNA: ENST00000488227.1

RALY-208, Transcript of RALY heterogeneous nuclear ribonucleoprotein, human

TSL 3

Gene RALY, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALY-208	ENST00000488227	WDR87	Q6ZQQ6	2873 aa		13.62	□□□□□ -0.23
RALY-208	ENST00000488227	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	CEP250	Q9BV73	2442 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	TMEM150C	B9EJG8	249 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227		H0YGG7	62 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	PPP6C	O00743	305 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	PLD2	O14939	933 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	POLR1C	O15160	346 aa	Predicted RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ULK1	O75385	1050 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	OR4F21	O95013	312 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	CHRNG	P07510	517 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	SERPINA6	P08185	405 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	PCNA	P12004	261 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	HSD3B1	P14060	373 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	FOLR1	P15328	257 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	HSD3B2	P26439	372 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ID4	P47928	161 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	RPL14	P50914	215 aa	Known RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ITGA1	P56199	1179 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ARF3	P61204	181 aa	Predicted RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	STXBP1	P61764	594 aa	Known RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	SKP1	P63208	163 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	MEF2A	Q02078	507 aa	Predicted RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	TGM3	Q08188	693 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	CYP4F3	Q08477	520 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	GRM7	Q14831	915 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	SH2D4B	Q5SQS7	431 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	TMEM164	Q5U3C3	297 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	GARNL3	Q5VVW2	1013 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	NIPAL1	Q6NVV3	410 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	CEACAM20	Q6UY09	585 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	THSD4	Q6ZMP0	1018 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	MTERF4	Q7Z6M4	381 aa	Known RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	CRLF3	Q8IUI8	442 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	7e-6	■■■■□ 20.7
RALY-208	ENST00000488227	CSNK1A1L	Q8N752	337 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	TTC29	Q8NA56	475 aa	Predicted RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	SRFBP1	Q8NEF9	429 aa	Known RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	NT5C	Q8TCD5	201 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	CCT6B	Q92526	530 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	MOCOS	Q96EN8	888 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	OR6C1	Q96RD1	312 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ASPSCR1	Q9BZE9	553 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	BRF2	Q9HAW0	419 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ACSS2	Q9NR19	701 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	IRAK4	Q9NWZ3	460 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ZNF225	Q9UK10	706 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.61	□□□□□ -0.23
RALY-208	ENST00000488227	TRAF6	Q9Y4K3	522 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	PCDHGA8	Q9Y5G5	932 aa		13.61	□□□□□ -0.23
RALY-208	ENST00000488227	HEATR5B	Q9P2D3	2071 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	SNRNP200	O75643	2136 aa	Known RBP	13.6	□□□□□ -0.23
RALY-208	ENST00000488227	SERTM1	A2A2V5	107 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	FITM1	A5D6W6	292 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	MANBA	O00462	879 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	NDUFS4	O43181	175 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	LCMT2	O60294	686 aa	Known RBP	13.6	□□□□□ -0.23
RALY-208	ENST00000488227	PRAMEF10	O60809	474 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	OR2B3	O76000	313 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	HBQ1	P09105	142 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	FGF5	P12034	268 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	GABRA4	P48169	554 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	ARFIP1	P53367	373 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	ARSF	P54793	590 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	VSX2	P58304	361 aa	Predicted RBP	13.6	□□□□□ -0.23
RALY-208	ENST00000488227	OCRL	Q01968	901 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	FOXM1	Q08050	763 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	KCNAB1	Q14722	419 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	NDUFA9	Q16795	377 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	FAM214A	Q32MH5	1076 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RALY-208	ENST00000488227	TMEM35A	Q53FP2	167 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	DCAF12	Q5T6F0	453 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	KANK2	Q63ZY3	851 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	CHSY3	Q70JA7	882 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	PPP1R3B	Q86XI6	285 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	BMPER	Q8N8U9	685 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	GBP7	Q8N8V2	638 aa	Predicted RBP	13.6	□□□□□ -0.23
RALY-208	ENST00000488227	ANKRD53	Q8N9V6	530 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	ZNF740	Q8NDX6	193 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	HUS1B	Q8NHY5	278 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	WDR20	Q8TBZ3	569 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	SLC13A3	Q8WWT9	602 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	SELENOM	Q8WWX9	145 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	USP7	Q93009	1102 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	ZNF501	Q96CX3	271 aa	Predicted RBP	13.6	□□□□□ -0.23
RALY-208	ENST00000488227	TM4SF19	Q96DZ7	209 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	CMTM7	Q96FZ5	175 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	TAAR9	Q96RI9	348 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	DDA1	Q9BW61	102 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	SPNS1	Q9H2V7	528 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	SLC39A1	Q9NY26	324 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	VTI1B	Q9UEU0	232 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227	SRPK3	Q9UPE1	567 aa		13.6	□□□□□ -0.23
RALY-208	ENST00000488227		A0A088AWK7	358 aa		13.59	□□□□□ -0.23
RALY-208	ENST00000488227	ITM2A	O43736	263 aa		13.59	□□□□□ -0.23
RALY-208	ENST00000488227	NRP2	O60462	931 aa		13.59	□□□□□ -0.23
RALY-208	ENST00000488227	LYPLA1	O75608	230 aa	Predicted RBP	13.59	□□□□□ -0.23
RALY-208	ENST00000488227	ZNF10	P21506	573 aa	Predicted RBP	13.59	□□□□□ -0.23

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