RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SP9P0CG40 484 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TCF4P15884 667 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 ITIH1P19827 911 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TYMPP19971 482 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 CD27P26842 260 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TIA1P31483 386 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 FRKP42685 505 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 NR0B1P51843 470 aaKnown RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 HUNKP57058 714 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 DCDC1P59894 354 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 STX1BP61266 288 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 GNB1P62873 340 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 CYCSP99999 105 aaKnown RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 AKAP17AQ02040 695 aaKnown RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 FOLH1Q04609 750 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TEFQ10587 303 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 MORF4L2Q15014 288 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 PTPN14Q15678 1187 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 ACKR1Q16570 336 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 MEP1BQ16820 701 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TYSND1Q2T9J0 566 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 SMU1Q2TAY7 513 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 GPR33Q49SQ1 333 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZRANB3Q5FWF4 1079 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 ARMCX4Q5H9R4 360 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 CCDC158Q5M9N0 1113 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 LRRC38Q5VT99 294 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF772Q68DY9 489 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 CYB5D1Q6P9G0 228 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 Q6ZSR9 355 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZER1Q7Z7L7 766 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 SIAH3Q8IW03 269 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 UNC45BQ8IWX7 931 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 KLHDC8BQ8IXV7 354 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TRIM58Q8NG06 486 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 OCC1Q8TAD7 63 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 SMAP2Q8WU79 429 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 GATAD1Q8WUU5 269 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 APOBEC4Q8WW27 367 aaKnown RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 KLHL5Q96PQ7 755 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 KRT12Q99456 494 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 IL12RB2Q99665 862 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 C17orf62Q9BQA9 187 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 CCDC3Q9BQI4 270 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 IDI2Q9BXS1 227 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 SHARPINQ9H0F6 387 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 THAP2Q9H0W7 228 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 DPEP2Q9H4A9 486 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF696Q9H7X3 374 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TMEM206Q9H813 350 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 MTHFD2LQ9H903 347 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 MAN2C1Q9NTJ4 1040 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 DNAJC17Q9NVM6 304 aaKnown RBP3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 TMOD3Q9NYL9 352 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 SEPT10Q9P0V9 454 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 LIPT1Q9Y234 373 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 NCKAP1Q9Y2A7 1128 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 PPP2R2CQ9Y2T4 447 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 NSG2Q9Y328 171 aa3.3□□□□□ -1.88
HMGB1P36-201ENST00000487709 A0A0B4J203 849 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 NKX6-3A6NJ46 265 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SNURFLB1AK76 121 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 CCER2I3L3R5 266 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF195O14628 629 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 FPGTO14772 594 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF263O14978 683 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 PGRMC2O15173 223 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 CTDSPLO15194 276 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ARHGEF9O43307 516 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SELENOFO60613 162 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 CYTIPO60759 359 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 GH1P01241 217 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 KRT3P12035 628 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 LBPP18428 481 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 CYP2A7P20853 494 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 RBMS1P29558 406 aaKnown RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC6A12P48065 614 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 PTENP60484 403 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ST8SIA6P61647 398 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SP3Q02447 781 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 RCN2Q14257 317 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLMAPQ14BN4 828 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 E2F5Q15329 346 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 FCN2Q15485 313 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 MTHFSDQ2M296 383 aaKnown RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 LBHQ53QV2 105 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 XKR3Q5GH77 459 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ARHGAP17Q68EM7 881 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 FAM166AQ6J272 317 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SLC25A47Q6Q0C1 308 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 LEKR1Q6ZMV7 388 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 LINC00696Q6ZRV3 163 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 PIGWQ7Z7B1 504 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 CREBRFQ8IUR6 639 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 SYCP3Q8IZU3 236 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ZNF843Q8N446 348 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 TCEANCQ8N8B7 351 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 KIAA0895Q8NCT3 520 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 ART5Q96L15 291 aa3.29□□□□□ -1.88
HMGB1P36-201ENST00000487709 C10orf90Q96M02 699 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms