RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 IPPKQ9H8X2 491 aa18.64■□□□□ 0.57
SEC22A-208ENST00000487572 ACTR8Q9H981 624 aa18.64■□□□□ 0.57
SEC22A-208ENST00000487572 CPNE5Q9HCH3 593 aa18.64■□□□□ 0.57
SEC22A-208ENST00000487572 IL17BQ9UHF5 180 aa18.64■□□□□ 0.57
SEC22A-208ENST00000487572 PCTPQ9UKL6 214 aa18.64■□□□□ 0.57
SEC22A-208ENST00000487572 MRPS2Q9Y399 296 aaKnown RBP18.64■□□□□ 0.57
SEC22A-208ENST00000487572 MRPS18BQ9Y676 258 aaKnown RBP18.64■□□□□ 0.57
SEC22A-208ENST00000487572 MAU2Q9Y6X3 613 aa18.64■□□□□ 0.57
SEC22A-208ENST00000487572 URB1O60287 2271 aaKnown RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 AHCTF1Q8WYP5 2266 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 C9J4A7 227 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 WT1P19544 449 aaPredicted RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 ITGAXP20702 1163 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 AHRP35869 848 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 OR1D4P47884 311 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 TMPRSS3P57727 454 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 NFKB2Q00653 900 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 RGS1Q08116 209 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 LAPTM5Q13571 262 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 TBCCQ15814 346 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 RBBP7Q16576 425 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 HIST2H2ACQ16777 129 aaPredicted RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 NDUFA9Q16795 377 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 NKAIN1Q4KMZ8 207 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 PAGE2BQ5JRK9 111 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 MLIPQ5VWP3 458 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 HIST2H2AA3Q6FI13 130 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 METTL2BQ6P1Q9 378 aaKnown RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 FAM198BQ6UWH4 519 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 ZYG11AQ6WRX3 759 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 ZNF517Q6ZMY9 492 aaPredicted RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 PPP4R1Q8TF05 950 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 WDR34Q96EX3 536 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 SEMA4BQ9NPR2 832 aaPredicted RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 ARGLU1Q9NWB6 273 aaPredicted RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 IFT80Q9P2H3 777 aaPredicted RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 GPN3Q9UHW5 284 aaPredicted RBP18.63■□□□□ 0.57
SEC22A-208ENST00000487572 DMXL2Q8TDJ6 3036 aa18.63■□□□□ 0.57
SEC22A-208ENST00000487572 G3V2L1 256 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 EFSO43281 561 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 WFS1O76024 890 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 RPS17P08708 135 aaKnown RBP18.62■□□□□ 0.57
SEC22A-208ENST00000487572 PCNAP12004 261 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 CREB1P16220 341 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 TSPAN8P19075 237 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 HNF4AP41235 474 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 CCNG1P51959 295 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 EMP3P54852 163 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 UCNP55089 124 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 RPS18P62269 152 aaKnown RBP18.62■□□□□ 0.57
SEC22A-208ENST00000487572 RPS15P62841 145 aaKnown RBP18.62■□□□□ 0.57
SEC22A-208ENST00000487572 HERVK_113P63132 956 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 SNRPNP63162 240 aaKnown RBP18.62■□□□□ 0.57
SEC22A-208ENST00000487572 CXADRP78310 365 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 PWP1Q13610 501 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 CASP8Q14790 479 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 GARNL3Q5VVW2 1013 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 ADNP2Q6IQ32 1131 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 CROCCP2Q86T23 111 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 SLC22A9Q8IVM8 553 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 ENDOVQ8N8Q3 282 aaKnown RBP18.62■□□□□ 0.57
SEC22A-208ENST00000487572 COL26A1Q96A83 441 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 CRELD1Q96HD1 420 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 TMEM237Q96Q45 408 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 EFHD1Q9BUP0 239 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 ERVK-6Q9BXR3 956 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 DRC3Q9H069 523 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 MKS1Q9NXB0 559 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 ZNF490Q9ULM2 529 aaPredicted RBP18.62■□□□□ 0.57
SEC22A-208ENST00000487572 SSUH2Q9Y2M2 353 aa18.62■□□□□ 0.57
SEC22A-208ENST00000487572 MDC1Q14676 2089 aaKnown RBP18.61■□□□□ 0.57
SEC22A-208ENST00000487572 A0A0A6YYC8 382 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-208ENST00000487572 ANKDD1BA6NHY2 528 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 C21orf140B9A014 251 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 I3L1I5 382 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-208ENST00000487572 OR7A17O14581 309 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 TERTO14746 1132 aaKnown RBP18.61■□□□□ 0.57
SEC22A-208ENST00000487572 SUPT7LO94864 414 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 CASP2P42575 452 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 PRKAA2P54646 552 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 CDH13P55290 713 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 NCF4Q15080 339 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 ZNF678Q5SXM1 525 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 ARHGAP40Q5TG30 622 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 FAM69BQ5VUD6 431 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 GRHL2Q6ISB3 625 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 TMEM214Q6NUQ4 689 aaKnown RBP18.61■□□□□ 0.57
SEC22A-208ENST00000487572 MED27Q6P2C8 311 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 ARHGEF39Q8N4T4 335 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 ARMC2Q8NEN0 867 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 TRPV3Q8NET8 790 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 TTLQ8NG68 377 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 OR52B6Q8NGF0 335 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 RDH11Q8TC12 318 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 NT5CQ8TCD5 201 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 CREB3L4Q8TEY5 395 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 ZNF483Q8TF39 744 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-208ENST00000487572 MMABQ96EY8 250 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-208ENST00000487572 FAM111AQ96PZ2 611 aa18.61■□□□□ 0.57
SEC22A-208ENST00000487572 CDK15Q96Q40 435 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms