RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 EML6Q6ZMW3 1958 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 FBN3Q75N90 2809 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 H7BY64 318 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 SMAPO00193 183 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 LIASO43766 372 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 RDH16O75452 317 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 NDUFS3O75489 264 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 CCNDBP1O95273 360 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 GAS8O95995 478 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 CD99P14209 185 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 CETN2P41208 172 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 IST1P53990 364 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 ABATP80404 500 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 OC90Q02509 493 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-228ENST00000487354 ABRAXAS2Q15018 415 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 NDUFA9Q16795 377 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 PCID2Q5JVF3 399 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 SLC5A8Q8N695 610 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 FBXO15Q8NCQ5 510 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-228ENST00000487354 PLPP5Q8NEB5 264 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 LILRB4Q8NHJ6 448 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 TM4SF19Q96DZ7 209 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 PRAP1Q96NZ9 151 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 CDCP1Q9H5V8 836 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 RNF6Q9Y252 685 aa14.41□□□□□ -0.1
MCF2L-228ENST00000487354 KCNE1BA0A087WTH5 132 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 A0A1B0GTH9 108 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 FAM221AA4D161 298 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 FAM90A27PA6NNH2 459 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 GOLGA8KD6RF30 607 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 GOLGA8TH3BQL2 631 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 DNAJB6O75190 326 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 CDC123O75794 336 aaPredicted RBP14.4□□□□□ -0.1
MCF2L-228ENST00000487354 F7P08709 466 aaPredicted RBP14.4□□□□□ -0.1
MCF2L-228ENST00000487354 IMPA1P29218 277 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 CLCN7P51798 805 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 ADARP55265 1226 aaKnown RBP14.4□□□□□ -0.1
MCF2L-228ENST00000487354 SESN2P58004 480 aaPredicted RBP14.4□□□□□ -0.1
MCF2L-228ENST00000487354 SPA17Q15506 151 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 MAPKAPK3Q16644 382 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 CMPK2Q5EBM0 449 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 EMC4Q5J8M3 183 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 CEP128Q6ZU80 1094 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 ADCK2Q7Z695 626 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 REXO1L1PQ8IX06 675 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 KCT2Q8NC54 265 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 FAM98AQ8NCA5 519 aaKnown RBP14.4□□□□□ -0.1
MCF2L-228ENST00000487354 OR5T3Q8NGG3 340 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 ZCCHC10Q8TBK6 192 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 MFSD3Q96ES6 412 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 CALR3Q96L12 384 aaKnown RBP14.4□□□□□ -0.1
MCF2L-228ENST00000487354 DLL4Q9NR61 685 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 RAB6BQ9NRW1 208 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 PLSCR2Q9NRY7 297 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 COQ3Q9NZJ6 369 aa14.4□□□□□ -0.1
MCF2L-228ENST00000487354 MAGEB17A8MXT2 336 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 KIF5CO60282 957 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 IFNB1P01574 187 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 ESR1P03372 595 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 APRTP07741 180 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 HOXD4P09016 255 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-228ENST00000487354 TRHRP34981 398 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-228ENST00000487354 PTGS2P35354 604 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 COILP38432 576 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-228ENST00000487354 RFC3P40938 356 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 SKIV2L2P42285 1042 aaKnown RBP14.39□□□□□ -0.11
MCF2L-228ENST00000487354 MLF1P58340 268 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 CES3Q6UWW8 571 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 RPS19BP1Q86WX3 136 aaKnown RBP14.39□□□□□ -0.11
MCF2L-228ENST00000487354 TGIF2LYQ8IUE0 185 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 ARMC10Q8N2F6 343 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 LPAR4Q99677 370 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 FOXC2Q99958 501 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 FAM114A2Q9NRY5 505 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 ABCF3Q9NUQ8 709 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 UTP6Q9NYH9 597 aaKnown RBP14.39□□□□□ -0.11
MCF2L-228ENST00000487354 CRYL1Q9Y2S2 319 aa14.39□□□□□ -0.11
MCF2L-228ENST00000487354 NSD1Q96L73 2696 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-228ENST00000487354 ZNF860A6NHJ4 632 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 E7EVH7 732 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 NDC80O14777 642 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 VAPBO95292 243 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 FTCDO95954 541 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 CATP04040 527 aaKnown RBP14.38□□□□□ -0.11
MCF2L-228ENST00000487354 TPOP07202 933 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 ZSCAN5DPP0CG00 497 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 TFEBP19484 476 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 CHRNB4P30926 498 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 STIP1P31948 543 aaKnown RBP14.38□□□□□ -0.11
MCF2L-228ENST00000487354 HSD17B2P37059 387 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 MEOX1P50221 254 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 ITGA8P53708 1063 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 RPS15AP62244 130 aaKnown RBP14.38□□□□□ -0.11
MCF2L-228ENST00000487354 NSDHLQ15738 373 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 RAD9BQ6WBX8 426 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 CENPUQ71F23 418 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 TMEM200AQ86VY9 491 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 CCDC71Q8IV32 467 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-228ENST00000487354 EID3Q8N140 333 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 AFAP1L2Q8N4X5 818 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms