RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 CUEDC1Q9NWM3 386 aaPredicted RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 ARL15Q9NXU5 204 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 COPG2Q9UBF2 871 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 MTO1Q9Y2Z2 717 aaKnown RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 OARD1Q9Y530 152 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 HS3ST3B1Q9Y662 390 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 KCNE2Q9Y6J6 123 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 USP9XQ93008 2570 aaPredicted RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 TCRBV9S1A1TA0A576 114 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 TRBC2A0A5B9 178 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 PABPN1LA6NDY0 278 aaKnown RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 CXorf49A8MYA2 514 aaPredicted RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 IDSB3KWA1 339 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 HPP00738 406 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ALPPP05187 535 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 SMIM10L1P0DMW3 83 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 NR1D1P20393 614 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 FBLP22087 321 aaKnown RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 CXCR2P25025 360 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 GSTM2P28161 218 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 SSTR1P30872 391 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 GP5P40197 560 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 BCL6P41182 706 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 MAGEA4P43358 317 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 EMP2P54851 167 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 PLTPP55058 493 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ATP6V0D1P61421 351 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CKAP4Q07065 602 aaKnown RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 CHAF1BQ13112 559 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 TSTA3Q13630 321 aaPredicted RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 E2F2Q14209 437 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CSHL1Q14406 222 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 HERC3Q15034 1050 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ZKSCAN8Q15776 578 aaPredicted RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 RBBP7Q16576 425 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 WHAMMP3Q1A5X7 153 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 TUBB8Q3ZCM7 444 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 GLE1Q53GS7 698 aaKnown RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 VWA2Q5GFL6 755 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 RPUSD3Q6P087 351 aaKnown RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 ZDHHC24Q6UX98 284 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 RIPOR1Q6ZS17 1223 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 Q6ZS92 163 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CEP128Q6ZU80 1094 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 NDUFAF7Q7L592 441 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CCDC91Q7Z6B0 441 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ADAMTSL2Q86TH1 951 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CEP97Q8IW35 865 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 TCAIMQ8N3R3 496 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ZADH2Q8N4Q0 377 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 MMGT1Q8N4V1 131 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 TBC1D19Q8N5T2 526 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 GALNT11Q8NCW6 608 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 PLPP5Q8NEB5 264 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 NT5CQ8TCD5 201 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ANKRD49Q8WVL7 239 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 RHBDF1Q96CC6 855 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 MMABQ96EY8 250 aaPredicted RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 SMIM10Q96HG1 83 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CABS1Q96KC9 395 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 OR4K3Q96R72 315 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CYTH2Q99418 400 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 RBBP8Q99708 897 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 BARD1Q99728 777 aaKnown RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 CRB3Q9BUF7 120 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 FUT8Q9BYC5 575 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 LHPPQ9H008 270 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 DPH5Q9H2P9 285 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 PELI2Q9HAT8 420 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 GPAMQ9HCL2 828 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 GPRC5BQ9NZH0 403 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 SLC17A6Q9P2U8 582 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CTNNAL1Q9UBT7 734 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 CTSFQ9UBX1 484 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ZFP69BQ9UJL9 534 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 C3orf18Q9UK00 162 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 MAU2Q9Y6X3 613 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 RELNP78509 3460 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 ICE1Q9Y2F5 2266 aa6.64□□□□□ -1.35
VPS50-218ENST00000485994 SPTAN1Q13813 2472 aaKnown RBP6.64□□□□□ -1.35
VPS50-218ENST00000485994 USP9YO00507 2555 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 SETXQ7Z333 2677 aaKnown RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 IGHV1-45A0A0A0MS14 117 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 A0A0A6YYC8 382 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 URADA6NGE7 173 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 I3L1I5 382 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 KIF2AO00139 706 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 CDC7O00311 574 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 P2RX6O15547 441 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SERPINA6P08185 405 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 CDH1P12830 882 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 ACPPP15309 386 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 CD1DP15813 335 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 STMN1P16949 149 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 GNAZP19086 355 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 CRABP2P29373 138 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 CASP2P42575 452 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SCTRP47872 440 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SLC6A12P48065 614 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SLC12A2P55011 1212 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms