RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 DPH2Q9BQC3 489 aaPredicted RBP11.28□□□□□ -0.6
HPS4-214ENST00000485842 EFHD1Q9BUP0 239 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 EFCAB11Q9BUY7 163 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 TMEM109Q9BVC6 243 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 SARGQ9BW04 601 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 DRC3Q9H069 523 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 IQCGQ9H095 443 aaKnown RBP11.28□□□□□ -0.6
HPS4-214ENST00000485842 C12orf65Q9H3J6 166 aaKnown RBP11.28□□□□□ -0.6
HPS4-214ENST00000485842 EHD1Q9H4M9 534 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 ACTL8Q9H568 366 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 ACTR8Q9H981 624 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 ACSS2Q9NR19 701 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 GPN3Q9UHW5 284 aaPredicted RBP11.28□□□□□ -0.6
HPS4-214ENST00000485842 ZFP69BQ9UJL9 534 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 KCND3Q9UK17 655 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 EMCNQ9ULC0 261 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 EPG5Q9HCE0 2579 aa11.28□□□□□ -0.6
HPS4-214ENST00000485842 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.6
HPS4-214ENST00000485842 SEC16AO15027 2179 aa11.27□□□□□ -0.6
HPS4-214ENST00000485842 PKD1L2Q7Z442 2459 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 WDFY3Q8IZQ1 3526 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 A0A0A6YYC8 382 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 ZNF891A8MT65 544 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 C21orf140B9A014 251 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 I3L1I5 382 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 RGS16O15492 202 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 DLX3O60479 287 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 PLIN3O60664 434 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 SPAG7O75391 227 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 PROCP04070 461 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 RPS17P08708 135 aaKnown RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 PRKAR1AP10644 381 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 PCNAP12004 261 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 IL1RNP18510 177 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 FBLP22087 321 aaKnown RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 ATP5F1P24539 256 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 AHRP35869 848 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 CCT5P48643 541 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 CCNG1P51959 295 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 SNRPNP63162 240 aaKnown RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 SLC18A2Q05940 514 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 RGS1Q08116 209 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 NCF4Q15080 339 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 PAGE2BQ5JRK9 111 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 BEND6Q5SZJ8 279 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 FAM69BQ5VUD6 431 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 GARNL3Q5VVW2 1013 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 HIST2H2AA3Q6FI13 130 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 ADNP2Q6IQ32 1131 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 ZNF517Q6ZMY9 492 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 RPS27LQ71UM5 84 aaKnown RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 ATP6V1E2Q96A05 226 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 COL26A1Q96A83 441 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 TM4SF19Q96DZ7 209 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 WDR34Q96EX3 536 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 MMABQ96EY8 250 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 SLC45A3Q96JT2 553 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 C17orf62Q9BQA9 187 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 IPPKQ9H8X2 491 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 ZNF304Q9HCX3 659 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 SEMA4BQ9NPR2 832 aaPredicted RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 PCTPQ9UKL6 214 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 GRID1Q9ULK0 1009 aa11.27□□□□□ -0.61
HPS4-214ENST00000485842 FARSAQ9Y285 508 aaKnown RBP11.27□□□□□ -0.61
HPS4-214ENST00000485842 SCN3AQ9NY46 2000 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 ZNF860A6NHJ4 632 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 ANKDD1BA6NHY2 528 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 K7ENP7 123 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 E2F3O00716 465 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 FFAR3O14843 346 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 NKX2-8O15522 239 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 GPR42O15529 346 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 CTIFO43310 598 aaKnown RBP11.26□□□□□ -0.61
HPS4-214ENST00000485842 FOXS1O43638 330 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 CAPN1P07384 714 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 RAB40ALP0C0E4 278 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 ZNF888P0CJ79 500 aaPredicted RBP11.26□□□□□ -0.61
HPS4-214ENST00000485842 MYL2P10916 166 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 PIM1P11309 404 aaPredicted RBP11.26□□□□□ -0.61
HPS4-214ENST00000485842 TSPAN8P19075 237 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 PTPN4P29074 926 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 CRHR1P34998 444 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 HNF4AP41235 474 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 AVPR1BP47901 424 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 EMP3P54852 163 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 FOXL2P58012 376 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 LAPTM5Q13571 262 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 TBCCQ15814 346 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 RBBP7Q16576 425 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 CCDC153Q494R4 210 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 TOR1AIP1Q5JTV8 583 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 ATP1A1-AS1Q5TC04 95 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 GRHL2Q6ISB3 625 aa11.26□□□□□ -0.61
HPS4-214ENST00000485842 TMEM214Q6NUQ4 689 aaKnown RBP11.26□□□□□ -0.61
HPS4-214ENST00000485842 METTL2BQ6P1Q9 378 aaKnown RBP11.26□□□□□ -0.61
HPS4-214ENST00000485842 PRMT9Q6P2P2 845 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms