RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 SLC26A1Q9H2B4 701 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 SPNS1Q9H2V7 528 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 ANKHQ9HCJ1 492 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 TUBD1Q9UJT1 453 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 ZNF180Q9UJW8 692 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 FOXS1O43638 330 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 ZNF500O60304 480 aaPredicted RBP18.18■□□□□ 0.5
SNX17-206ENST00000484886 C1QL1O75973 258 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 GFAPP14136 432 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 IL1RNP18510 177 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 CXCR2P25025 360 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 GGT5P36269 586 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 CCL11P51671 97 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 RBBP7Q16576 425 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 PDK4Q16654 411 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 LGSNQ5TDP6 509 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 TMEM214Q6NUQ4 689 aaKnown RBP18.18■□□□□ 0.5
SNX17-206ENST00000484886 APLFQ8IW19 511 aaPredicted RBP18.18■□□□□ 0.5
SNX17-206ENST00000484886 TMEM151BQ8IW70 566 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 KLHDC8AQ8IYD2 350 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 ZNF843Q8N446 348 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 STT3BQ8TCJ2 826 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 TM4SF19Q96DZ7 209 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 ABHD17AQ96GS6 310 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 ATOH8Q96SQ7 321 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 SPSB2Q99619 263 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 CRB3Q9BUF7 120 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 TRIM55Q9BYV6 548 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 SLC25A18Q9H1K4 315 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 ZNF71Q9NQZ8 489 aaPredicted RBP18.18■□□□□ 0.5
SNX17-206ENST00000484886 GPRC5BQ9NZH0 403 aa18.18■□□□□ 0.5
SNX17-206ENST00000484886 PTBP2Q9UKA9 531 aaKnown RBP18.18■□□□□ 0.5
SNX17-206ENST00000484886 SNRPAP09012 282 aaKnown RBP18.17■□□□□ 0.5
SNX17-206ENST00000484886 ZGLP1P0C6A0 271 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 C1GALT1C1LP0DN25 315 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 MYBL2P10244 700 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 AHRP35869 848 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 SCTRP47872 440 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 KLC1Q07866 573 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 PWP1Q13610 501 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 SLBPQ14493 270 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNX17-206ENST00000484886 SLC29A2Q14542 456 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 ACAP2Q15057 778 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 SYT16Q17RD7 645 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 VWA2Q5GFL6 755 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 ATG9BQ674R7 924 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 MED25Q71SY5 747 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 PPP1R32Q7Z5V6 425 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 KRT78Q8N1N4 520 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 ARHGEF39Q8N4T4 335 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 AMER3Q8N944 861 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 TMEM102Q8N9M5 508 aaPredicted RBP18.17■□□□□ 0.5
SNX17-206ENST00000484886 CCT6BQ92526 530 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 MOCOSQ96EN8 888 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 SCYL1Q96KG9 808 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 CD244Q9BZW8 370 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 MKKSQ9NPJ1 570 aaPredicted RBP18.17■□□□□ 0.5
SNX17-206ENST00000484886 P4HTMQ9NXG6 502 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 CPSF2Q9P2I0 782 aaKnown RBP18.17■□□□□ 0.5
SNX17-206ENST00000484886 ZFP69BQ9UJL9 534 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 G3BP2Q9UN86 482 aaKnown RBP18.17■□□□□ 0.5
SNX17-206ENST00000484886 MAP4K5Q9Y4K4 846 aa18.17■□□□□ 0.5
SNX17-206ENST00000484886 HEMK1Q9Y5R4 338 aaPredicted RBP18.17■□□□□ 0.5
SNX17-206ENST00000484886 A6NL46 340 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 SGK494L7N484 410 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 NSA2O95478 260 aaKnown RBP18.16■□□□□ 0.5
SNX17-206ENST00000484886 IGHEP01854 428 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 MMP11P24347 488 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 AGTR2P50052 363 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 CSRP3P50461 194 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 MAT1AQ00266 395 aaKnown RBP18.16■□□□□ 0.5
SNX17-206ENST00000484886 LACTB2Q53H82 288 aaPredicted RBP18.16■□□□□ 0.5
SNX17-206ENST00000484886 XKR6Q5GH73 641 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 MFSD4BQ5TF39 518 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 SLCO4C1Q6ZQN7 724 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 PRSS41Q7RTY9 318 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 LRRC70Q7Z2Q7 622 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 EIF1ADQ8N9N8 165 aaKnown RBP18.16■□□□□ 0.5
SNX17-206ENST00000484886 TRPV3Q8NET8 790 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 RHEBL1Q8TAI7 183 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 UBLCP1Q8WVY7 318 aaPredicted RBP18.16■□□□□ 0.5
SNX17-206ENST00000484886 FER1L6-AS2Q96M78 137 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 CCDC77Q9BR77 488 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 SARGQ9BW04 601 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 SEMA3GQ9NS98 782 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 C14orf105Q9NVL8 296 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 HCN3Q9P1Z3 774 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 OPTCQ9UBM4 332 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 C3orf18Q9UK00 162 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 ANGPTL3Q9Y5C1 460 aa18.16■□□□□ 0.5
SNX17-206ENST00000484886 CCDC189A1A4V9 331 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 VSTM2BA6NLU5 285 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 ESPNB1AK53 854 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 H0YIG0 161 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 KLHL18O94889 574 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 HEXBP07686 556 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 HNF4AP41235 474 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 SNRPNP63162 240 aaKnown RBP18.15■□□□□ 0.5
SNX17-206ENST00000484886 SKP1P63208 163 aa18.15■□□□□ 0.5
SNX17-206ENST00000484886 HERC3Q15034 1050 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms