RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 OLFM1Q99784 485 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 RBCK1Q9BYM8 510 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 LIME1Q9H400 295 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 TRIM45Q9H8W5 580 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 RAB6BQ9NRW1 208 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 RNF6Q9Y252 685 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 MRFAP1Q9Y605 127 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 FBN3Q75N90 2809 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 SMAPO00193 183 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 TXNDC9O14530 226 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 RDH16O75452 317 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 CDC123O75794 336 aaPredicted RBP12.09□□□□□ -0.47
UBR4-213ENST00000483922 VAPBO95292 243 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 TSPAN12O95859 305 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 B3GALT4O96024 378 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 CYC1P08574 325 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 STIP1P31948 543 aaKnown RBP12.09□□□□□ -0.47
UBR4-213ENST00000483922 RPL22P35268 128 aaKnown RBP12.09□□□□□ -0.47
UBR4-213ENST00000483922 FDFT1P37268 417 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
UBR4-213ENST00000483922 CETN2P41208 172 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 CLCN7P51798 805 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 SLC26A5P58743 744 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 NAA25Q14CX7 972 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 SPA17Q15506 151 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 EXT1Q16394 746 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 TYSND1Q2T9J0 566 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 CMPK2Q5EBM0 449 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 CENPUQ71F23 418 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 RPS19BP1Q86WX3 136 aaKnown RBP12.09□□□□□ -0.47
UBR4-213ENST00000483922 CCDC71Q8IV32 467 aaPredicted RBP12.09□□□□□ -0.47
UBR4-213ENST00000483922 ACRBPQ8NEB7 543 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 PPHLN1Q8NEY8 458 aaKnown RBP12.09□□□□□ -0.47
UBR4-213ENST00000483922 FAM57AQ8TBR7 257 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
UBR4-213ENST00000483922 FEZF1A0PJY2 475 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 GFYI3L273 518 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 PRRG2O14669 202 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 NDC80O14777 642 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 SLC25A12O75746 678 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 FTCDO95954 541 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 GAS8O95995 478 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 IFNB1P01574 187 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 APRTP07741 180 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 CHRM3P20309 590 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 MSX1P28360 303 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 IMPA1P29218 277 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 PTGS2P35354 604 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 COILP38432 576 aaPredicted RBP12.08□□□□□ -0.48
UBR4-213ENST00000483922 AGTR2P50052 363 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 NAP1L1P55209 391 aaKnown RBP12.08□□□□□ -0.48
UBR4-213ENST00000483922 DLX5P56178 289 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 MLF1P58340 268 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 ABATP80404 500 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 ABRAXAS2Q15018 415 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 NSDHLQ15738 373 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 NDUFA9Q16795 377 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 ADCK2Q7Z695 626 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 CD163Q86VB7 1156 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 SLC26A11Q86WA9 606 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 SULF2Q8IWU5 870 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 FBXO15Q8NCQ5 510 aaPredicted RBP12.08□□□□□ -0.48
UBR4-213ENST00000483922 NFAM1Q8NET5 270 aaPredicted RBP12.08□□□□□ -0.48
UBR4-213ENST00000483922 OR52N2Q8NGI0 321 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 C1orf54Q8WWF1 131 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 ASB11Q8WXH4 323 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 PEX11GQ96HA9 241 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 TMEM184CQ9NVA4 438 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 C19orf25Q9UFG5 118 aaPredicted RBP12.08□□□□□ -0.48
UBR4-213ENST00000483922 AMFRQ9UKV5 643 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 NAALAD2Q9Y3Q0 740 aa12.08□□□□□ -0.48
UBR4-213ENST00000483922 TCRBV7S3A2A0A539 114 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 CTAGE15A4D2H0 777 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 ZNF860A6NHJ4 632 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 FAM90A27PA6NNH2 459 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 MAGEB17A8MXT2 336 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 E7EVH7 732 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 FANCGO15287 622 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 HS6ST1O60243 411 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 MLYCDO95822 493 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 HOXD4P09016 255 aaPredicted RBP12.07□□□□□ -0.48
UBR4-213ENST00000483922 ZNF24P17028 368 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 TFEBP19484 476 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 MGAT1P26572 445 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 TRHRP34981 398 aaPredicted RBP12.07□□□□□ -0.48
UBR4-213ENST00000483922 SKIV2L2P42285 1042 aaKnown RBP12.07□□□□□ -0.48
UBR4-213ENST00000483922 ITGA8P53708 1063 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 ADARP55265 1226 aaKnown RBP12.07□□□□□ -0.48
UBR4-213ENST00000483922 BTG2P78543 158 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 ACTN3Q08043 901 aaPredicted RBP12.07□□□□□ -0.48
UBR4-213ENST00000483922 SNX1Q13596 522 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 CUL1Q13616 776 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 ZNF549Q6P9A3 640 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 CTAGE6Q86UF2 777 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 TGIF2LYQ8IUE0 185 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 LGI4Q8N135 537 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 MPP5Q8N3R9 675 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms