RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 MMP15P51511 669 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 PDX1P52945 283 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 MAPK12P53778 367 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 CUL3Q13618 768 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 SLMAPQ14BN4 828 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 WDR38Q5JTN6 314 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 ELFN2Q5R3F8 820 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 HOOK3Q86VS8 718 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 C10orf53Q8N6V4 93 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.4□□□□□ -1.87
GTF3A-207ENST00000482655 ATAD1Q8NBU5 361 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 ADAD2Q8NCV1 583 aaKnown RBP3.4□□□□□ -1.87
GTF3A-207ENST00000482655 RNF128Q8TEB7 428 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 GRK7Q8WTQ7 553 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 MR1Q95460 341 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 INTS14Q96SY0 518 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 LITAFQ99732 161 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 PRRG4Q9BZD6 226 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 MIS12Q9H081 205 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 BICC1Q9H694 974 aaKnown RBP3.4□□□□□ -1.87
GTF3A-207ENST00000482655 CDH20Q9HBT6 801 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 MYNNQ9NPC7 610 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 OLFML3Q9NRN5 406 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 GKN1Q9NS71 199 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 ABCB8Q9NUT2 735 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 TXNDC16Q9P2K2 825 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 DNAJB9Q9UBS3 223 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 ITGA11Q9UKX5 1188 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 CDH7Q9ULB5 785 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 RNF150Q9ULK6 438 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 KCNK7Q9Y2U2 307 aa3.4□□□□□ -1.87
GTF3A-207ENST00000482655 ALPK3Q96L96 1907 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 A0A0G2JNG1 304 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 A0A1W2PRB8 838 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 TMEM221A6NGB7 291 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 OOEPA6NGQ2 149 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 AP5Z1O43299 807 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 PGLSO95336 258 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ACSL3O95573 720 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 IGHV2-70P01814 119 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 NR3C1P04150 777 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 RLN1P04808 185 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 FAM58BPP0C7Q3 252 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 SUPT20HL2P0C7V6 817 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 PATE4P0C8F1 98 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ADRA2CP18825 462 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 GNAZP19086 355 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 CD22P20273 847 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 NR1D1P20393 614 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 PTPN3P26045 913 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 DCTP40126 519 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 HNRNPKP61978 463 aaKnown RBP eCLIP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 POLR2LP62875 67 aaKnown RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 RUNX1T1Q06455 604 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 PRKAA1Q13131 559 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 MFAP5Q13361 173 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 KIR2DS5Q14953 304 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 SMU1Q2TAY7 513 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ANKRD20A4Q4UJ75 823 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ANKRD20A8PQ5CZ79 823 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ANKRD20A2Q5SQ80 823 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 GRTP1Q5TC63 336 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ANKRD20A1Q5TYW2 823 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ANKRD20A3Q5VUR7 823 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ARHGAP17Q68EM7 881 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 CASC4Q6P4E1 433 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 IYDQ6PHW0 289 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 LINGO4Q6UY18 593 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 RAPH1Q70E73 1250 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 OTOAQ7RTW8 1153 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 PIWIL4Q7Z3Z4 852 aaKnown RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ARHGAP22Q7Z5H3 698 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 CPSF7Q8N684 471 aaKnown RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 CORO2AQ92828 525 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 THOC1Q96FV9 657 aaKnown RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 SGK494Q96LW2 274 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 MRPL9Q9BYD2 267 aaKnown RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 EGLN1Q9GZT9 426 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 GFRA4Q9GZZ7 299 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 MMADHCQ9H3L0 296 aaPredicted RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 ACKR4Q9NPB9 350 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 SLC52A3Q9NQ40 469 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 SERINC1Q9NRX5 453 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 SLC38A7Q9NVC3 462 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 COQ3Q9NZJ6 369 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 VPS18Q9P253 973 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 LEF1Q9UJU2 399 aaPredicted RBP3.39□□□□□ -1.87
GTF3A-207ENST00000482655 MTUS1Q9ULD2 1270 aa3.39□□□□□ -1.87
GTF3A-207ENST00000482655 CEMIPQ8WUJ3 1361 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 SSC5DA1L4H1 1573 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 ZNF609O15014 1411 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 A0A1W2PPW3 197 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 HHLA1C9JL84 531 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 DNM1LO00429 736 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 GAPDHSO14556 408 aaPredicted RBP3.38□□□□□ -1.87
GTF3A-207ENST00000482655 ZNF263O14978 683 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 OR10H2O60403 315 aa3.38□□□□□ -1.87
GTF3A-207ENST00000482655 RNASEH1O60930 286 aaKnown RBP3.38□□□□□ -1.87
GTF3A-207ENST00000482655 GCNT3O95395 438 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms