RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 LHPPQ9H008 270 aa8.83□□□□□ -1
CALD1-220ENST00000482470 SELENONQ9NZV5 590 aa8.83□□□□□ -1
CALD1-220ENST00000482470 STOX2Q9P2F5 926 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 SEC14L3Q9UDX4 400 aa8.83□□□□□ -1
CALD1-220ENST00000482470 FBXW2Q9UKT8 454 aa8.83□□□□□ -1
CALD1-220ENST00000482470 ATG2BQ96BY7 2078 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TMX2-CTNND1H3BSU7 103 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PPIBP23284 216 aaKnown RBP8.83□□□□□ -1
CALD1-220ENST00000482470 PRMT2P55345 433 aa8.83□□□□□ -1
CALD1-220ENST00000482470 CDC42P60953 191 aa8.83□□□□□ -1
CALD1-220ENST00000482470 RUNX1T1Q06455 604 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TMIGD1Q6UXZ0 262 aa8.83□□□□□ -1
CALD1-220ENST00000482470 MTSS1LQ765P7 747 aa8.83□□□□□ -1
CALD1-220ENST00000482470 CCDC80Q76M96 950 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PIWIL3Q7Z3Z3 882 aaKnown RBP8.83□□□□□ -1
CALD1-220ENST00000482470 TRIM48Q8IWZ4 208 aa8.83□□□□□ -1
CALD1-220ENST00000482470 REM2Q8IYK8 340 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 LGI4Q8N135 537 aa8.83□□□□□ -1
CALD1-220ENST00000482470 NAGSQ8N159 534 aa8.83□□□□□ -1
CALD1-220ENST00000482470 MCFD2Q8NI22 146 aa8.83□□□□□ -1
CALD1-220ENST00000482470 CLIP3Q96DZ5 547 aa8.83□□□□□ -1
CALD1-220ENST00000482470 C12orf66Q96MD2 445 aa8.83□□□□□ -1
CALD1-220ENST00000482470 AIF1LQ9BQI0 150 aa8.83□□□□□ -1
CALD1-220ENST00000482470 NDEL1Q9GZM8 345 aa8.83□□□□□ -1
CALD1-220ENST00000482470 DDX28Q9NUL7 540 aaKnown RBP8.83□□□□□ -1
CALD1-220ENST00000482470 PSME2Q9UL46 239 aa8.83□□□□□ -1
CALD1-220ENST00000482470 KCNK6Q9Y257 313 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TMED5Q9Y3A6 229 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PI15O43692 258 aa8.82□□□□□ -1
CALD1-220ENST00000482470 SOX14O95416 240 aa8.82□□□□□ -1
CALD1-220ENST00000482470 LATS1O95835 1130 aa8.82□□□□□ -1
CALD1-220ENST00000482470 APOA1P02647 267 aa8.82□□□□□ -1
CALD1-220ENST00000482470 PTNP21246 168 aa8.82□□□□□ -1
CALD1-220ENST00000482470 SMN1Q16637 294 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 IFI44LQ53G44 452 aa8.82□□□□□ -1
CALD1-220ENST00000482470 PYCR3Q53H96 274 aa8.82□□□□□ -1
CALD1-220ENST00000482470 PRAMEF14Q5SWL7 426 aa8.82□□□□□ -1
CALD1-220ENST00000482470 PRAMEF13Q5VWM6 474 aa8.82□□□□□ -1
CALD1-220ENST00000482470 CBARPQ8N350 705 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 DPP10Q8N608 796 aa8.82□□□□□ -1
CALD1-220ENST00000482470 ZNF548Q8NEK5 533 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 CLMPQ9H6B4 373 aa8.82□□□□□ -1
CALD1-220ENST00000482470 EPS8L2Q9H6S3 715 aa8.82□□□□□ -1
CALD1-220ENST00000482470 ABCG2Q9UNQ0 655 aa8.82□□□□□ -1
CALD1-220ENST00000482470 CORO2BQ9UQ03 480 aa8.82□□□□□ -1
CALD1-220ENST00000482470 BRCA1P38398 1863 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 FEZF1A0PJY2 475 aa8.82□□□□□ -1
CALD1-220ENST00000482470 H0YAE9 185 aa8.82□□□□□ -1
CALD1-220ENST00000482470 H3BMQ9 156 aa8.82□□□□□ -1
CALD1-220ENST00000482470 M0R129 80 aa8.82□□□□□ -1
CALD1-220ENST00000482470 EFCAB14O75071 495 aa8.82□□□□□ -1
CALD1-220ENST00000482470 CYP7B1O75881 506 aa8.82□□□□□ -1
CALD1-220ENST00000482470 RPN2P04844 631 aa8.82□□□□□ -1
CALD1-220ENST00000482470 CD36P16671 472 aa8.82□□□□□ -1
CALD1-220ENST00000482470 AMD1P17707 334 aa8.82□□□□□ -1
CALD1-220ENST00000482470 DDX5P17844 614 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 FPR1P21462 350 aa8.82□□□□□ -1
CALD1-220ENST00000482470 PIGAP37287 484 aa8.82□□□□□ -1
CALD1-220ENST00000482470 CDK6Q00534 326 aa8.82□□□□□ -1
CALD1-220ENST00000482470 RBM48Q5RL73 367 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 C9orf64Q5T6V5 341 aa8.82□□□□□ -1
CALD1-220ENST00000482470 Q6ZPB1 254 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 SLC34A3Q8N130 599 aa8.82□□□□□ -1
CALD1-220ENST00000482470 RASGEF1AQ8N9B8 481 aa8.82□□□□□ -1
CALD1-220ENST00000482470 HTRA1Q92743 480 aa8.82□□□□□ -1
CALD1-220ENST00000482470 MAGEB10Q96LZ2 347 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 COG8Q96MW5 612 aa8.82□□□□□ -1
CALD1-220ENST00000482470 NUAK2Q9H093 628 aa8.82□□□□□ -1
CALD1-220ENST00000482470 C11orf49Q9H6J7 331 aa8.82□□□□□ -1
CALD1-220ENST00000482470 KAT8Q9H7Z6 458 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 IL21Q9HBE4 155 aa8.82□□□□□ -1
CALD1-220ENST00000482470 DCAF13Q9NV06 445 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 FAM120CQ9NX05 1096 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 TRNAU1APQ9NX07 287 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 ZNF282Q9UDV7 671 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 PCDHGB3Q9Y5G1 929 aa8.82□□□□□ -1
CALD1-220ENST00000482470 FZD6O60353 706 aa8.82□□□□□ -1
CALD1-220ENST00000482470 GADD45GO95257 159 aa8.82□□□□□ -1
CALD1-220ENST00000482470 NFATC1O95644 943 aa8.82□□□□□ -1
CALD1-220ENST00000482470 IFNW1P05000 195 aa8.82□□□□□ -1
CALD1-220ENST00000482470 BCHEP06276 602 aa8.82□□□□□ -1
CALD1-220ENST00000482470 TIMP2P16035 220 aa8.82□□□□□ -1
CALD1-220ENST00000482470 ITGA2P17301 1181 aa8.82□□□□□ -1
CALD1-220ENST00000482470 EIF2B2P49770 351 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 RPP38P78345 283 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 INAQ16352 499 aa8.82□□□□□ -1
CALD1-220ENST00000482470 TCEAL5Q5H9L2 206 aa8.82□□□□□ -1
CALD1-220ENST00000482470 ALG1LQ6GMV1 187 aa8.82□□□□□ -1
CALD1-220ENST00000482470 KLHL35Q6PF15 583 aa8.82□□□□□ -1
CALD1-220ENST00000482470 GPR65Q8IYL9 337 aa8.82□□□□□ -1
CALD1-220ENST00000482470 ZNF740Q8NDX6 193 aa8.82□□□□□ -1
CALD1-220ENST00000482470 JPH3Q8WXH2 748 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 CIDECQ96AQ7 238 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 TRMT61BQ9BVS5 477 aaKnown RBP8.82□□□□□ -1
CALD1-220ENST00000482470 SLC6A13Q9NSD5 602 aa8.82□□□□□ -1
CALD1-220ENST00000482470 SLC25A37Q9NYZ2 338 aa8.82□□□□□ -1
CALD1-220ENST00000482470 DPP7Q9UHL4 492 aa8.82□□□□□ -1
CALD1-220ENST00000482470 MBD1Q9UIS9 605 aaPredicted RBP8.82□□□□□ -1
CALD1-220ENST00000482470 ST14Q9Y5Y6 855 aa8.82□□□□□ -1
CALD1-220ENST00000482470 SLC1A7O00341 560 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms