RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 OLAHQ9NV23 265 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 CORO1CQ9ULV4 474 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 OSGIN2Q9Y236 505 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 LRRK2Q5S007 2527 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 SGK494L7N484 410 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 CELA2AP08217 269 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 ENO2P09104 434 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 ITGAMP11215 1152 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 CDH1P12830 882 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 IL1RNP18510 177 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 IL10P22301 178 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 ELK3P41970 407 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 XCR1P46094 333 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 AGTR2P50052 363 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 CCR8P51685 355 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 PER3P56645 1201 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 INAQ16352 499 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 PHKG1Q16816 387 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 FAM45BPQ6NSW5 357 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 CREG2Q8IUH2 290 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 KLHL7Q8IXQ5 586 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 MFSD9Q8NBP5 474 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 KCT2Q8NC54 265 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 FAM45AQ8TCE6 357 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 LRRC39Q96DD0 335 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 CFAP36Q96G28 342 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 SNF8Q96H20 258 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 IMMP1LQ96LU5 166 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 VN1R1Q9GZP7 353 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 SLC22A7Q9Y694 548 aa12.71□□□□□ -0.37
CTDSP1-208ENST00000482272 LRRTM2O43300 516 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 OR1F1O43749 312 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 JRKO75564 520 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 SKP1P63208 163 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 DR1Q01658 176 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 CSHL1Q14406 222 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 HERC3Q15034 1050 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 BTBD16Q32M84 506 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 NIPAL1Q6NVV3 410 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 HIBCHQ6NVY1 386 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 ABHD11Q8NFV4 315 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 OR4K1Q8NGD4 311 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 OR56A3Q8NH54 315 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 ZCCHC10Q8TBK6 192 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 PYCR2Q96C36 320 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 PDLIM5Q96HC4 596 aaKnown RBP12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 ZNF354BQ96LW1 612 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 OLFM1Q99784 485 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 SLX1AQ9BQ83 275 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 SARGQ9BW04 601 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 RNF32Q9H0A6 362 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 HCN3Q9P1Z3 774 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 PYCARDQ9ULZ3 195 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 CHMP2BQ9UQN3 213 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 NAALAD2Q9Y3Q0 740 aa12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 USP9YO00507 2555 aaPredicted RBP12.7□□□□□ -0.38
CTDSP1-208ENST00000482272 PRRC2CQ9Y520 2896 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 IGHV3-20A0A0C4DH32 117 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 A0A1B0GUH1 482 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 TRBC2A0A5B9 178 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 OR5H15A6NDH6 313 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 OR2W5A6NFC9 320 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 A8MUI8 341 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 E2F3O00716 465 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 SEC24DO94855 1032 aaPredicted RBP12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 RASAL1O95294 804 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 CLDN1O95832 211 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 GUCA1CO95843 209 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 WDPCPO95876 746 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 F10P00742 488 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 CRYABP02511 175 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 PAFAH1B1P43034 410 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 ARL4CP56559 192 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 ZNF33BQ06732 778 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 ACTN3Q08043 901 aaPredicted RBP12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 PWP1Q13610 501 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 FASTKD3Q14CZ7 662 aaKnown RBP12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 PLAG1Q6DJT9 500 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 ANKRD37Q7Z713 158 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 PLPP5Q8NEB5 264 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 DNAJB8Q8NHS0 232 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 FBXL8Q96CD0 374 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 OR1F2PQ96R84 312 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 PSAT1Q9Y617 370 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 SAR1BQ9Y6B6 198 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 TEX264Q9Y6I9 313 aa12.69□□□□□ -0.38
CTDSP1-208ENST00000482272 SCN3AQ9NY46 2000 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 URADA6NGE7 173 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 CCDC188H7C350 402 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 NDUFS4O43181 175 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 RDH16O75452 317 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 SERPIND1P05546 499 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 COL8A1P27658 744 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 ITGA8P53708 1063 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 GNG11P61952 73 aa12.68□□□□□ -0.38
CTDSP1-208ENST00000482272 MEF2AQ02078 507 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms