RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 WDR13Q9H1Z4 485 aa4.95□□□□□ -1.62
SF3B1-210ENST00000482158 P2RY12Q9H244 342 aa4.95□□□□□ -1.62
SF3B1-210ENST00000482158 RNF121Q9H920 327 aa4.95□□□□□ -1.62
SF3B1-210ENST00000482158 FGF22Q9HCT0 170 aa4.95□□□□□ -1.62
SF3B1-210ENST00000482158 PLCXD1Q9NUJ7 323 aa4.95□□□□□ -1.62
SF3B1-210ENST00000482158 CACNG5Q9UF02 275 aa4.95□□□□□ -1.62
SF3B1-210ENST00000482158 IL36AQ9UHA7 158 aa4.95□□□□□ -1.62
SF3B1-210ENST00000482158 ELF5Q9UKW6 265 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-210ENST00000482158 ANTXRLA6NF34 631 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 ACSL4O60488 711 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 ZNF821O75541 412 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-210ENST00000482158 IGLV1-44P01699 117 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 RPL35AP18077 110 aaKnown RBP4.94□□□□□ -1.62
SF3B1-210ENST00000482158 CYP2A7P20853 494 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 ELAVL4P26378 380 aaKnown RBP4.94□□□□□ -1.62
SF3B1-210ENST00000482158 PIK3R1P27986 724 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 OR3A2P47893 321 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 NPBWR1P48145 328 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 XGP55808 180 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 CLDN17P56750 224 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 ST8SIA6P61647 398 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 ASIC1P78348 528 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 TMEM132DQ14C87 1099 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 FCRLAQ7L513 359 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 IQCA1Q86XH1 822 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 OR4C15Q8NGM1 316 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 WBP2Q969T9 261 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 NXPE2Q96DL1 559 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 ZNF486Q96H40 463 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-210ENST00000482158 C2orf48Q96LS8 159 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 NEDD4LQ96PU5 975 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 DNAI2Q9GZS0 605 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 MRPL17Q9NRX2 175 aaKnown RBP4.94□□□□□ -1.62
SF3B1-210ENST00000482158 PANK4Q9NVE7 773 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 TBC1D13Q9NVG8 400 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 DNAJC17Q9NVM6 304 aaKnown RBP4.94□□□□□ -1.62
SF3B1-210ENST00000482158 MDFICQ9P1T7 246 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 FBXL4Q9UKA2 621 aa4.94□□□□□ -1.62
SF3B1-210ENST00000482158 GLTPD2A6NH11 291 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 C15orf61A6NNL5 157 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 SLC33A1O00400 549 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-210ENST00000482158 GH1P01241 217 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 YES1P07947 543 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 GOT1P17174 413 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 IER3P46695 156 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 ADARP55265 1226 aaKnown RBP4.93□□□□□ -1.62
SF3B1-210ENST00000482158 PAX9P55771 341 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 EFTUD2Q15029 972 aaKnown RBP eCLIP4.93□□□□□ -1.62
SF3B1-210ENST00000482158 ZNF674Q2M3X9 581 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 ZNF542PQ5EBM4 170 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 GLRA4Q5JXX5 417 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 IYDQ6PHW0 289 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 DHRS11Q6UWP2 260 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 COX8CQ7Z4L0 72 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 AQP12AQ8IXF9 295 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 ZC3H3Q8IXZ2 948 aaKnown RBP4.93□□□□□ -1.62
SF3B1-210ENST00000482158 CCDC170Q8IYT3 715 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 ARHGAP45Q92619 1136 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 PRMT1Q99873 361 aaKnown RBP4.93□□□□□ -1.62
SF3B1-210ENST00000482158 CACNG6Q9BXT2 260 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 MMADHCQ9H3L0 296 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-210ENST00000482158 ABCB8Q9NUT2 735 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 KIF26BQ2KJY2 2108 aa4.93□□□□□ -1.62
SF3B1-210ENST00000482158 ANKDD1BA6NHY2 528 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 E5RGE8 158 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 SAP30O75446 220 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 CLDN1O95832 211 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 MT3P25713 68 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 OPRL1P41146 370 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 DCDC1P59894 354 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 SNRPD1P62314 119 aaKnown RBP4.92□□□□□ -1.62
SF3B1-210ENST00000482158 GUCY2DQ02846 1103 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 KBTBD12Q3ZCT8 623 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 SIAH3Q8IW03 269 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 NUP93Q8N1F7 819 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 RAB42Q8N4Z0 105 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 MAGED4Q96JG8 741 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 RASL10BQ96S79 203 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 TDRD1Q9BXT4 1180 aaKnown RBP4.92□□□□□ -1.62
SF3B1-210ENST00000482158 NSG2Q9Y328 171 aa4.92□□□□□ -1.62
SF3B1-210ENST00000482158 KIF5CO60282 957 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 SOCS5O75159 536 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 MAGEB1P43366 347 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 ATP12AP54707 1039 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 HYAL1Q12794 435 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 CDH18Q13634 790 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 MTF1Q14872 753 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 DUSP5Q16690 384 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 ZFP69Q49AA0 526 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.91□□□□□ -1.62
SF3B1-210ENST00000482158 GFI1BQ5VTD9 330 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 PM20D1Q6GTS8 502 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 FIP1L1Q6UN15 594 aaKnown RBP4.91□□□□□ -1.62
SF3B1-210ENST00000482158 TMCO5AQ8N6Q1 288 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-210ENST00000482158 KIAA0895Q8NCT3 520 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 ADAD2Q8NCV1 583 aaKnown RBP4.91□□□□□ -1.62
SF3B1-210ENST00000482158 CKAP2Q8WWK9 683 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 NR4A3Q92570 626 aa4.91□□□□□ -1.62
SF3B1-210ENST00000482158 ASCL2Q99929 193 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms