RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SPACA7Q96KW9 195 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 LRGUKQ96M69 825 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 CENPKQ9BS16 269 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 MRPS30Q9NP92 439 aaKnown RBP10.57□□□□□ -0.72
VTI1A-204ENST00000480057 SERHLQ9NQF3 203 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 CUEDC1Q9NWM3 386 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-204ENST00000480057 C2orf42Q9NWW7 574 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 BTNL2Q9UIR0 455 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 PNMA8BQ9ULN7 279 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-204ENST00000480057 PCDHB3Q9Y5E6 796 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 ENTPD2Q9Y5L3 495 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 SNX13Q9Y5W8 968 aa10.57□□□□□ -0.72
VTI1A-204ENST00000480057 A0A1W2PR77 199 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 H3BNX3 289 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 H7BY64 318 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 CASQ2O14958 399 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 TGFB1P01137 390 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 CHRM5P08912 532 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 ZCCHC18P0CG32 403 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 COX7A2P14406 83 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 HOXB9P17482 250 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 HOXA6P31267 233 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 PTDSS1P48651 473 aaKnown RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 GSK3BP49841 420 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 TRA2BP62995 288 aaKnown RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 RACK1P63244 317 aaKnown RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 UBE2IP63279 158 aaKnown RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 LIPEQ05469 1076 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 PDE7AQ13946 482 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 UGT8Q16880 541 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 DUOXA1Q1HG43 343 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 RUNDC3AQ59EK9 446 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 ADNP2Q6IQ32 1131 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 ZNF425Q6IV72 752 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 SLC30A9Q6PML9 568 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 TRIM48Q8IWZ4 208 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 SDR16C5Q8N3Y7 309 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 C2orf73Q8N5S3 287 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 RNF148Q8N7C7 305 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 ZNF740Q8NDX6 193 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 CLHC1Q8NHS4 586 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 CCL4L1Q8NHW4 92 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 DNAJB14Q8TBM8 379 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 CCDC115Q96NT0 180 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 PRAP1Q96NZ9 151 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 GBP5Q96PP8 586 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 KCTD14Q9BQ13 255 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 ACAT2Q9BWD1 397 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 EBPLQ9BY08 206 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 TPSD1Q9BZJ3 242 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 BHLHE41Q9C0J9 482 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 PAIP1Q9H074 479 aaKnown RBP10.56□□□□□ -0.72
VTI1A-204ENST00000480057 VCX3BQ9H321 246 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 SRMSQ9H3Y6 488 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 XKR8Q9H6D3 395 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 REEP4Q9H6H4 257 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 PRM3Q9NNZ6 103 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 ATAD3AQ9NVI7 634 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 TAAR2Q9P1P5 351 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 MAGEL2Q9UJ55 1249 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 PACSIN3Q9UKS6 424 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 NEUROG3Q9Y4Z2 214 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 KLK4Q9Y5K2 254 aa10.56□□□□□ -0.72
VTI1A-204ENST00000480057 IGKV1-8A0A0C4DH67 115 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 CCDC163A0A0D9SF12 145 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 PRSS51A0A1B0GVH4 220 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 GNG14A0A1W2PPG7 69 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 RNASET2O00584 256 aaKnown RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 CAPN5O15484 640 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 TNFSF14O43557 240 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 SCN2BO60939 215 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 ANP32DO95626 131 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 EML2O95834 649 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 VIPP01282 170 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 UMPSP11172 480 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 HOXB6P17509 224 aaKnown RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 TCN1P20061 433 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 PPIBP23284 216 aaKnown RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 PSMB5P28074 263 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 PEBP1P30086 187 aaKnown RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 SLC7A1P30825 629 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 TSFMP43897 325 aaKnown RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 CXCL12P48061 93 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 WNT3P56703 355 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 PHC1P78364 1004 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 MEF2AQ02078 507 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 CYP4F3Q08477 520 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 SIM2Q14190 667 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-204ENST00000480057 ZIC1Q15915 447 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 SLC5A12Q1EHB4 618 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 PGS1Q32NB8 556 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 CMPK2Q5EBM0 449 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 MTX3Q5HYI7 312 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 RABL3Q5HYI8 236 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 WLSQ5T9L3 541 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 CPTPQ5TA50 214 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 SPATA24Q86W54 205 aa10.55□□□□□ -0.72
VTI1A-204ENST00000480057 ADGRF3Q8IZF5 1079 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms