RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ZNF740Q8NDX6 193 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 TRPV3Q8NET8 790 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 CT55Q8WUE5 264 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 UBE2E3Q969T4 207 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 SLC45A3Q96JT2 553 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 C1QTNF3Q9BXJ4 246 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 CHST8Q9H2A9 424 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 SPNS1Q9H2V7 528 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 SENP1Q9P0U3 644 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 CDC14AQ9UNH5 594 aa10.32□□□□□ -0.76
ATG4B-219ENST00000479941 MDC1Q14676 2089 aaKnown RBP10.32□□□□□ -0.76
ATG4B-219ENST00000479941 URADA6NGE7 173 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 A8MT66 165 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 K7ENP7 123 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 E2F3O00716 465 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 RGS16O15492 202 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 PRPF4O43172 522 aaKnown RBP eCLIP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 NDUFS4O43181 175 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 EFSO43281 561 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 UGDHO60701 494 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 SIX3O95343 332 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 RECKO95980 971 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 CAPN1P07384 714 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 F8A1P23610 371 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 ATP5F1P24539 256 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 EEF1DP29692 281 aaKnown RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 MC1RQ01726 317 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 RGS1Q08116 209 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 VAC14Q08AM6 782 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 SRSF6Q13247 344 aaKnown RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 GTF2H2Q13888 395 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 CRTC2Q53ET0 693 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 LIPJQ5W064 366 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 LCN10Q6JVE6 187 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 TMEM214Q6NUQ4 689 aaKnown RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 GTF2H2CQ6P1K8 395 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 INO80CQ6PI98 192 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 FAM198BQ6UWH4 519 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 LRIG3Q6UXM1 1119 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 GOLGA7Q7Z5G4 137 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 ARHGEF39Q8N4T4 335 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 ANKRD53Q8N9V6 530 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 NT5CQ8TCD5 201 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 SNRNP27Q8WVK2 155 aaKnown RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 CCDC126Q96EE4 140 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 C10orf90Q96M02 699 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 ZIM3Q96PE6 472 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 SMC6Q96SB8 1091 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 DRC3Q9H069 523 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 IQCGQ9H095 443 aaKnown RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 IPPKQ9H8X2 491 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 ZNF304Q9HCX3 659 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 MKS1Q9NXB0 559 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 IFT80Q9P2H3 777 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 IL17BQ9UHF5 180 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 GPN3Q9UHW5 284 aaPredicted RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 PCTPQ9UKL6 214 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 FARSAQ9Y285 508 aaKnown RBP10.31□□□□□ -0.76
ATG4B-219ENST00000479941 CACNA1BQ00975 2339 aa10.31□□□□□ -0.76
ATG4B-219ENST00000479941 ANKDD1BA6NHY2 528 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 LRRC14BA6NHZ5 514 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 ZNF891A8MT65 544 aaPredicted RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 DLX3O60479 287 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 PLIN3O60664 434 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 PRAMEF4O60810 478 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 CLEC3AO75596 197 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 MED26O95402 600 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 NSA2O95478 260 aaKnown RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 ALBP02768 609 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 SERPIND1P05546 499 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 SERPINA6P08185 405 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 RPS17P08708 135 aaKnown RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 PTPN4P29074 926 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 HPDP32754 393 aaPredicted RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 HNF4AP41235 474 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 AVPR1BP47901 424 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 SKP1P63208 163 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 CXADRP78310 365 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 HERC3Q15034 1050 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 NCF4Q15080 339 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 CEP85LQ5SZL2 805 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 PRAMEF9Q5VWM5 478 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 MLIPQ5VWP3 458 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 GRHL2Q6ISB3 625 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 NIPAL1Q6NVV3 410 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 MRPL14Q6P1L8 145 aaKnown RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 OVCH1Q7RTY7 1134 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 SRRM1Q8IYB3 904 aaKnown RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 ENDOVQ8N8Q3 282 aaKnown RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 BANPQ8N9N5 519 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 KCT2Q8NC54 265 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 RDH11Q8TC12 318 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 STARD8Q92502 1023 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 ATP6V1E2Q96A05 226 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 FKBP10Q96AY3 582 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 APOPT1Q96IL0 206 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 MACROD1Q9BQ69 325 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 SLC26A1Q9H2B4 701 aa10.3□□□□□ -0.76
ATG4B-219ENST00000479941 NOL11Q9H8H0 719 aaKnown RBP10.3□□□□□ -0.76
ATG4B-219ENST00000479941 ACTR8Q9H981 624 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms