RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 IDH2P48735 452 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 CYP4F8P98187 520 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ELP6Q0PNE2 266 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ARHGEF7Q14155 803 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 LRRC26Q2I0M4 334 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ARMCX4Q5H9R4 360 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 GPR26Q8NDV2 337 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 FAM126AQ9BYI3 521 aaPredicted RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 SMG9Q9H0W8 520 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 ADPRHL2Q9NX46 363 aa12.86□□□□□ -0.35
PDZRN3-208ENST00000479530 NPIPB15A6NHN6 443 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 YY2O15391 372 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 ABLIM3O94929 683 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 MED26O95402 600 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 RGS6P49758 472 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 UGT2B15P54855 530 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 FOXD4Q12950 439 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 INO80DQ53TQ3 878 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 ZMAT1Q5H9K5 638 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 GPRC6AQ5T6X5 926 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 SLX4IPQ5VYV7 408 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 TSEN54Q7Z6J9 526 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 CLECL1Q8IZS7 167 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 BEND7Q8N7W2 519 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 MAL2Q969L2 176 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 C7orf34Q96L11 122 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 FEVQ99581 238 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 ASIC5Q9NY37 505 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 LINC00854A0A1B0GVQ3 168 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 CLCA1A8K7I4 914 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 MRPS14O60783 128 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 SEMA3DO95025 777 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 EBLN1P0CF75 366 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 EPB42P16452 691 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 RRM2P31350 389 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 CD70P32970 193 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 ITGA1P56199 1179 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 SF1Q15637 639 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 TMC5Q6UXY8 1006 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF621Q6ZSS3 439 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 SERPINA11Q86U17 422 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 OR52J3Q8NH60 311 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 SELENOMQ8WWX9 145 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 FCGR1BQ92637 280 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 APOLD1Q96LR9 279 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 OR5M11Q96RB7 305 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 PANX1Q96RD7 426 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 NTMT1Q9BV86 223 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 LATS2Q9NRM7 1088 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 AP3M1Q9Y2T2 418 aa12.85□□□□□ -0.35
PDZRN3-208ENST00000479530 MN1Q10571 1320 aaPredicted RBP12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 PRRG1O14668 218 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 KIAA0513O60268 411 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 TRBC1P01850 177 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF7P17097 686 aaPredicted RBP12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 TTLL9Q3SXZ7 439 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 SPANXN2Q5MJ10 180 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 CBLL1Q75N03 491 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 CCDC190Q86UF4 302 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 UBQLNLQ8IYU4 475 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 TMEM175Q9BSA9 504 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 OR2B2Q9GZK3 357 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 CCDC59Q9P031 241 aaKnown RBP12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 SPASTQ9UBP0 616 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 TRPS1Q9UHF7 1281 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 A3GALT2U3KPV4 340 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 SCN5AQ14524 2016 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 EVPLLA8MZ36 301 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 TMEM229AB2RXF0 380 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 C9P02748 559 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 ACRV1P26436 265 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 CASP9P55211 416 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 B4GALNT1Q00973 533 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 ST3GAL4Q11206 333 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 BBS7Q8IWZ6 715 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 STK40Q8N2I9 435 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 OR2A14Q96R47 310 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 GABARAPL3Q9BY60 117 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF226Q9NYT6 803 aa12.84□□□□□ -0.35
PDZRN3-208ENST00000479530 FAM172BPA6NC97 362 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 FPGTO14772 594 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 MTX2O75431 263 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 GGT2P36268 569 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 SLC15A1P46059 708 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 ARPC4P59998 168 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 BCL2L1Q07817 233 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 SMU1Q2TAY7 513 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 LRRC66Q68CR7 880 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 EIF3MQ7L2H7 374 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 OR8H2Q8N162 312 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 ZBTB2Q8N680 514 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 SLC5A8Q8N695 610 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 KBTBD8Q8NFY9 601 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms