RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SYTL3Q4VX76 610 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 TUBA1AQ71U36 451 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 HSD11B1LQ7Z5J1 315 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 GALNT10Q86SR1 603 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 C1orf52Q8N6N3 182 aaKnown RBP23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 CHST14Q8NCH0 376 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 AUTS2Q8WXX7 1259 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 TMEM159Q96B96 161 aa23.74■■□□□ 1.39
SYNGAP1-206ENST00000479510 MGAT4DA6NG13 374 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 PCDHGA12O60330 932 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 LILRB3O75022 631 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 LRG1P02750 347 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 ELP6Q0PNE2 266 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 HENMT1Q5T8I9 393 aaKnown RBP23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 ENTHD1Q8IYW4 607 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 HS6ST3Q8IZP7 471 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 APH1BQ8WW43 257 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 SLC38A4Q969I6 547 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 VPS35Q96QK1 796 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 RUBCNLQ9H714 662 aa23.73■■□□□ 1.39
SYNGAP1-206ENST00000479510 MAN1A2O60476 641 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 PABPC1P11940 636 aaKnown RBP23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 EPHA2P29317 976 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 TIA1P31483 386 aaKnown RBP eCLIP23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 UGT2B10P36537 528 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 CRYBA2P53672 197 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 SELENOWP63302 87 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 RBBP4Q09028 425 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 CBX3Q13185 183 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 DDX39BQ13838 428 aaKnown RBP23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 Q6ZVU0 165 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 RAVER1Q8IY67 606 aaKnown RBP23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 OR2A12Q8NGT7 310 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 SCAMP4Q969E2 229 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 TAMM41Q96BW9 452 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 LGALS12Q96DT0 336 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 ITPAQ9BY32 194 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 SLCO3A1Q9UIG8 710 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 OSGIN1Q9UJX0 560 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 PCDHGA6Q9Y5G7 932 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 MTX2O75431 263 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 GGT2P36268 569 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 TGFBR2P37173 567 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 CCR3P51677 355 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 VBP1P61758 197 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 SMN1Q16637 294 aaKnown RBP23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 CYP2A13Q16696 494 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 FAM124AQ86V42 546 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 P3H2Q8IVL5 708 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 OR7G3Q8NG95 312 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 CDC26Q8NHZ8 85 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 BTN2A2Q8WVV5 523 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 MYDGFQ969H8 173 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 OR4K3Q96R72 315 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 HEPHQ9BQS7 1158 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 AASSQ9UDR5 926 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 PMF1-BGLAPU3KQ54 211 aa23.72■■□□□ 1.39
SYNGAP1-206ENST00000479510 PLXNA2O75051 1894 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 ATG13O75143 517 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 ANXA8P13928 327 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 TBCEQ15813 527 aaPredicted RBP23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 INAQ16352 499 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 ANKRD33Q7Z3H0 272 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 KIAA1958Q8N8K9 716 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 FBXO15Q8NCQ5 510 aaPredicted RBP23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 FOPNLQ96NB1 174 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 SLC46A2Q9BY10 475 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 RC3H2Q9HBD1 1191 aaKnown RBP23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 DOLKQ9UPQ8 538 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 KCNE2Q9Y6J6 123 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 SLC5A10A0PJK1 596 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 KRT87PA6NCN2 255 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 TMEM229AB2RXF0 380 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 CTSAP10619 480 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 CD36P16671 472 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 RRM2P31350 389 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 RPL3P39023 403 aaKnown RBP23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 PRLHRP49683 370 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 DGCR6Q14129 220 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 ZNF284Q2VY69 593 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 ASTLQ6HA08 431 aaPredicted RBP23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 CCDC149Q6ZUS6 474 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 BTLAQ7Z6A9 289 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 PSD2Q9BQI7 771 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 BTBD2Q9BX70 525 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 SLIRPQ9GZT3 109 aaKnown RBP23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 RASSF1Q9NS23 344 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 PSORS1C1Q9UIG5 152 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 RNF6Q9Y252 685 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 LYVE1Q9Y5Y7 322 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 A3GALT2U3KPV4 340 aa23.71■■□□□ 1.39
SYNGAP1-206ENST00000479510 UPK3BL1B0FP48 263 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 UPK3BL2E5RIL1 263 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 NUDT7P0C024 238 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 BMP4P12644 408 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 FCHO2Q0JRZ9 810 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 GAB1Q13480 694 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 LRRC73Q5JTD7 316 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 MED27Q6P2C8 311 aa23.7■■□□□ 1.38
SYNGAP1-206ENST00000479510 Q6ZVL8 140 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms