RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SGK494L7N484 410 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 CDC40O60508 579 aaKnown RBP eCLIP16.13■□□□□ 0.17
VIM-204ENST00000478746 PRMT3O60678 531 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 IL1RNP18510 177 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 NAP1L1P55209 391 aaKnown RBP16.13■□□□□ 0.17
VIM-204ENST00000478746 SLC26A5P58743 744 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 ABRAXAS2Q15018 415 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 PCGF5Q86SE9 256 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 CCDC71Q8IV32 467 aaPredicted RBP16.13■□□□□ 0.17
VIM-204ENST00000478746 PPFIBP2Q8ND30 876 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 PPHLN1Q8NEY8 458 aaKnown RBP16.13■□□□□ 0.17
VIM-204ENST00000478746 PRAP1Q96NZ9 151 aa16.13■□□□□ 0.17
VIM-204ENST00000478746 TP63Q9H3D4 680 aaPredicted RBP16.13■□□□□ 0.17
VIM-204ENST00000478746 DNAJB12Q9NXW2 375 aaKnown RBP16.13■□□□□ 0.17
VIM-204ENST00000478746 AKR1B15C9JRZ8 316 aaPredicted RBP16.12■□□□□ 0.17
VIM-204ENST00000478746 KLRC4-KLRK1H3BQV0 150 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 SMAPO00193 183 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 PSIP1O75475 530 aaKnown RBP16.12■□□□□ 0.17
VIM-204ENST00000478746 CATP04040 527 aaKnown RBP16.12■□□□□ 0.17
VIM-204ENST00000478746 TFEBP19484 476 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 TPP2P29144 1249 aaPredicted RBP16.12■□□□□ 0.17
VIM-204ENST00000478746 ATP5DP30049 168 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 FMO4P31512 558 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 FDFT1P37268 417 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 MEOX1P50221 254 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 OR4D2P58180 307 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 PMPCAQ10713 525 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 GBX1Q14549 363 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 SPA17Q15506 151 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 CTSL3PQ5NE16 218 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 THEMIS2Q5TEJ8 643 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 ZNF227Q86WZ6 799 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 CLYBLQ8N0X4 340 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 MPP5Q8N3R9 675 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 SLC35B2Q8TB61 432 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 ELP5Q8TE02 316 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 FAM136AQ96C01 138 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
VIM-204ENST00000478746 MACROD1Q9BQ69 325 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 TRIM45Q9H8W5 580 aaPredicted RBP16.12■□□□□ 0.17
VIM-204ENST00000478746 ANKHQ9HCJ1 492 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 KLF13Q9Y2Y9 288 aaPredicted RBP16.12■□□□□ 0.17
VIM-204ENST00000478746 DNHD1Q96M86 4753 aa16.12■□□□□ 0.17
VIM-204ENST00000478746 E7ENX8 843 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 HS6ST1O60243 411 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 CDC123O75794 336 aaPredicted RBP16.11■□□□□ 0.17
VIM-204ENST00000478746 SLC16A8O95907 504 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 CHRM3P20309 590 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 IL10P22301 178 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 STIP1P31948 543 aaKnown RBP16.11■□□□□ 0.17
VIM-204ENST00000478746 RFC3P40938 356 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 HLCSP50747 726 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 ITGA8P53708 1063 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 RHAGQ02094 409 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 TAP2Q03519 686 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 FOXD4Q12950 439 aaPredicted RBP16.11■□□□□ 0.17
VIM-204ENST00000478746 KLHL38Q2WGJ6 581 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 ACSBG2Q5FVE4 666 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 PCID2Q5JVF3 399 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 MEI1Q5TIA1 1274 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 TMEM214Q6NUQ4 689 aaKnown RBP16.11■□□□□ 0.17
VIM-204ENST00000478746 VN1R4Q7Z5H5 301 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 SULF2Q8IWU5 870 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 KIF2BQ8N4N8 673 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 OTUD6BQ8N6M0 293 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 ZNF480Q8WV37 535 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 BIRC8Q96P09 236 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 TMEM184CQ9NVA4 438 aa16.11■□□□□ 0.17
VIM-204ENST00000478746 KCNE1BA0A087WTH5 132 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 TMEM200CA6NKL6 621 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 MAGEB17A8MXT2 336 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 H3BMM5 538 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 KLK8O60259 260 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 KIF5CO60282 957 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 NIPSNAP2O75323 286 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 PDE9AO76083 593 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 FOSL1P15407 271 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 MLF1P58340 268 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 RPS15AP62244 130 aaKnown RBP16.1■□□□□ 0.17
VIM-204ENST00000478746 CEBPEQ15744 281 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 CMPK2Q5EBM0 449 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 ACAD11Q709F0 780 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 SDCCAG8Q86SQ7 713 aaPredicted RBP16.1■□□□□ 0.17
VIM-204ENST00000478746 RPRMLQ8N4K4 120 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 C16orf52Q8NHV5 167 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 TSLPQ969D9 159 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 PEX11GQ96HA9 241 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 SEC16BQ96JE7 1060 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 GALPQ9UBC7 116 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 ST6GALNAC2Q9UJ37 374 aa16.1■□□□□ 0.17
VIM-204ENST00000478746 PHF3Q92576 2039 aaKnown RBP16.09■□□□□ 0.17
VIM-204ENST00000478746 PEX1O43933 1283 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 RDH16O75452 317 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 SYF2O95926 243 aaKnown RBP16.09■□□□□ 0.17
VIM-204ENST00000478746 HRH2P25021 359 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 TRHRP34981 398 aaPredicted RBP16.09■□□□□ 0.17
VIM-204ENST00000478746 NUP107P57740 925 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 MPP1Q00013 466 aa16.09■□□□□ 0.17
VIM-204ENST00000478746 KLF1Q13351 362 aaPredicted RBP16.09■□□□□ 0.17
VIM-204ENST00000478746 ARHGAP11AQ6P4F7 1023 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms