RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LEF1Q9UJU2 399 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 LIPT1Q9Y234 373 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 FOCADQ5VW36 1801 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 PAPPA2Q9BXP8 1791 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 GOLGB1Q14789 3259 aaKnown RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 OTOFQ9HC10 1997 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 IL16Q14005 1332 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF609O15014 1411 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 DOCK2Q92608 1830 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM72CH0Y354 149 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 SUPT20HL2P0C7V6 817 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF853P0CG23 659 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 FGF5P12034 268 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 DPEP1P16444 411 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 GNAZP19086 355 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 AZGP1P25311 298 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 PRKCIP41743 596 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 GMPSP49915 693 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 PDX1P52945 283 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 E2F5Q15329 346 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 C14orf177Q52M58 125 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 PARP10Q53GL7 1025 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 TCTE1Q5JU00 501 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 CCNYL2Q5T2Q4 361 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM72AQ5TYM5 149 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM72DQ6L9T8 149 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 C11orf63Q6NUN7 778 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ENPP7Q6UWV6 458 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ARHGAP22Q7Z5H3 698 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM72BQ86X60 149 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 CIARTQ8N365 385 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 METTL27Q8N6F8 245 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 THAP8Q8NA92 274 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ATAD1Q8NBU5 361 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 OR2T12Q8NG77 320 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF473Q8WTR7 871 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 MYADMQ96S97 322 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 Q9H8V8 135 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 LMAN1LQ9HAT1 526 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZBTB20Q9HC78 741 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 ERAP1Q9NZ08 941 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 CDH7Q9ULB5 785 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 MMP24Q9Y5R2 645 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 USP16Q9Y5T5 823 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 MYH8P13535 1937 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 UBN2Q6ZU65 1347 aa3.7□□□□□ -1.82
CDC42BPA-212ENST00000478573 COL4A5P29400 1685 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 A0A1W2PN81 502 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 OOEPA6NGQ2 149 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM86B1E9PN63 330 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 H0YAE9 185 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 PLOD2O00469 737 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 EDIL3O43854 480 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 PRKNO60260 465 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 MOCS3O95396 460 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 VIMP08670 466 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM86B2P0C5J1 330 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 SMIM18P0DKX4 95 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 HSPA8P11142 646 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 CHRNA7P36544 502 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 HSD17B3P37058 310 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 FMO5P49326 533 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 UGT3A2Q3SY77 523 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 MCMDC2Q4G0Z9 681 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 NHSL2Q5HYW2 709 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC10A5Q5PT55 438 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 SPOUT1Q5T280 376 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 TXNRD3NBQ6F5E7 133 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 LINC00696Q6ZRV3 163 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 OTOAQ7RTW8 1153 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 PIWIL3Q7Z3Z3 882 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF554Q86TJ5 538 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 NFE4Q86UQ8 179 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 NBPF5PQ86XG9 351 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM219AQ8IW50 185 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 CFAP206Q8IYR0 622 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 WDSUB1Q8N9V3 476 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF485Q8NCK3 441 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 DBF4BQ8NFT6 615 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 VANGL1Q8TAA9 524 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 FIBINQ8TAL6 211 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 GRHL3Q8TE85 626 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 HSD17B8Q92506 261 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 DNASE1L2Q92874 299 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC47A1Q96FL8 570 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 RAD9AQ99638 391 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 RTP3Q9BQQ7 232 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 THUMPD2Q9BTF0 503 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 DNAI2Q9GZS0 605 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 EGLN1Q9GZT9 426 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 TAAR2Q9P1P5 351 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZDHHC2Q9UIJ5 367 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC7A7Q9UM01 511 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 TCF19Q9Y242 345 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 ATAD5Q96QE3 1844 aa3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 MYO5AQ9Y4I1 1855 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-212ENST00000478573 MYH2Q9UKX2 1941 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 UTRNP46939 3433 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 TRAV24A0A0B4J272 114 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms