RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PPWD1Q96BP3 646 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 CENPNQ96H22 339 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 REXO5Q96IC2 774 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 SHDQ96IW2 340 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 PPM1MQ96MI6 270 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 RNF145Q96MT1 663 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 ZNF570Q96NI8 536 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 CAMK1GQ96NX5 476 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 INSM2Q96T92 566 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 CPPED1Q9BRF8 314 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 MENTQ9BUN1 341 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 BDH2Q9BUT1 245 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 C9orf16Q9BUW7 83 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 DUSP26Q9BV47 211 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 OSBPL10Q9BXB5 764 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 PAIP1Q9H074 479 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 TTYH1Q9H313 450 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 OSGEPL1Q9H4B0 414 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 REEP4Q9H6H4 257 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 KAT8Q9H7Z6 458 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 COPS7BQ9H9Q2 264 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 SERHLQ9NQF3 203 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 OLAHQ9NV23 265 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 TMEM184CQ9NVA4 438 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 VAPAQ9P0L0 249 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 ANKMY1Q9P2S6 941 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 ZNF282Q9UDV7 671 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 PACSIN3Q9UKS6 424 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 PCDHGB4Q9UN71 923 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 SNX7Q9UNH6 387 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 GPSM3Q9Y4H4 160 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 DGKBQ9Y6T7 804 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 COL4A2P08572 1712 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 GNG14A0A1W2PPG7 69 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 TCRBV21S2A2A0A5A6 115 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ARHGAP10A1A4S6 786 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 MAGEA13PA6NCF6 341 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 C9JVG2 144 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 H3BQ06 376 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 CAPN5O15484 640 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 DENRO43583 198 aaKnown RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 DFNA5O60443 496 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 DEAF1O75398 565 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 RAP2AP10114 183 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 UQCRBP14927 111 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 HOXB9P17482 250 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 GPX2P18283 190 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 GABRG2P18507 467 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ATP6V1B2P21281 511 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 PEX2P28328 305 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 CMPK1P30085 196 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 MSX2P35548 267 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 AHRP35869 848 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 RXRGP48443 463 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 BLKP51451 505 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 CHRNB3Q05901 458 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 TGM3Q08188 693 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ILF3Q12906 894 aaKnown RBP eCLIP7.62□□□□□ -1.19
VMA21-203ENST00000477649 BIRC2Q13490 618 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 TSTA3Q13630 321 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 VEZF1Q14119 521 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ELOAQ14241 798 aaKnown RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 HEPACAMQ14CZ8 416 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 MLF2Q15773 248 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 RPE65Q16518 533 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 CYP51A1Q16850 503 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 UGT8Q16880 541 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 PGS1Q32NB8 556 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 LEXMQ3ZCV2 418 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 CATSPEREQ5SY80 951 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 TMTC4Q5T4D3 741 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 DEPDC1Q5TB30 811 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 KHDRBS2Q5VWX1 349 aaKnown RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 KIAA0895LQ68EN5 471 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ENPP7Q6UWV6 458 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 RNF111Q6ZNA4 994 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 COMMD6Q7Z4G1 85 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ABI3BPQ7Z7G0 1075 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 SLC9B2Q86UD5 537 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 CACUL1Q86Y37 369 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 SPPL2CQ8IUH8 684 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 RBM12BQ8IXT5 1001 aaKnown RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 MICU2Q8IYU8 434 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ADGRG5Q8IZF4 528 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 GJD3Q8N144 294 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 TMEM145Q8NBT3 493 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 ZNF548Q8NEK5 533 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 GOT1L1Q8NHS2 421 aaPredicted RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.62□□□□□ -1.19
VMA21-203ENST00000477649 CANT1Q8WVQ1 401 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 THAP11Q96EK4 314 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 FAM120BQ96EK7 910 aaKnown RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 ZNF583Q96ND8 569 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 PANX1Q96RD7 426 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 PKP2Q99959 881 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 OSBPL11Q9BXB4 747 aa7.62□□□□□ -1.19
VMA21-203ENST00000477649 REXO4Q9GZR2 422 aaKnown RBP7.62□□□□□ -1.19
VMA21-203ENST00000477649 CHRDQ9H2X0 955 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms