RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 AGXTP21549 392 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 GDF10P55107 478 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 DAOAP59103 153 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 TSPAN5P62079 268 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 HSF2Q03933 536 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CYP51A1Q16850 503 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 RAB41Q5JT25 222 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ZNF691Q5VV52 312 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 TMEM198Q66K66 360 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PLET1Q6UQ28 207 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PAMR1Q6UXH9 720 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 RTL4Q6ZR62 310 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CDKL3Q8IVW4 592 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PELI3Q8N2H9 469 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PQLC3Q8N755 202 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 NAT16Q8N8M0 369 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CDYL2Q8N8U2 506 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PDLIM5Q96HC4 596 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 NPY6RQ99463 290 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 GAS2L1Q99501 681 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 BBS2Q9BXC9 721 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ALG2Q9H553 416 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CSNK1G1Q9HCP0 422 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 IL1RAPQ9NPH3 570 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 THUMPD1Q9NXG2 353 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PAK5Q9P286 719 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 MTF2Q9Y483 593 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ALG5Q9Y673 324 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 RNF215Q9Y6U7 377 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 BCLAF3A2AJT9 711 aaKnown RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 WASH4PA8MWX3 477 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 M0QYT0 321 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 SELENOFO60613 162 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 EIF3GO75821 320 aaKnown RBP eCLIP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 PLATP00750 562 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 PRG2P13727 222 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 SELPP16109 830 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 TFEBP19484 476 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 ITGB8P26012 769 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 CTNNB1P35222 781 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 NDUFV1P49821 464 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RNF144AP50876 292 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 GPR143P51810 404 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 CDH13P55290 713 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 FAM189BP81408 668 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 CAPRIN1Q14444 709 aaKnown RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 IRF3Q14653 427 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 PPA1Q15181 289 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 NOMO2Q5JPE7 1267 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 NPNTQ6UXI9 565 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 C17orf107Q6ZR85 190 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 LRRC8DQ7L1W4 858 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 FAM131BQ86XD5 332 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 FAM193BQ96PV7 902 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 POLR1EQ9GZS1 481 aaKnown RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 MS4A7Q9GZW8 240 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 NCOR1P1Q9H4R4 102 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 NIT2Q9NQR4 276 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 IMPAD1Q9NX62 359 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 SPHK1Q9NYA1 384 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 HECAQ9UBI9 543 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 MIOXQ9UGB7 285 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 EVLQ9UI08 416 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 FZD10Q9ULW2 581 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 A0A1W2PQ09 198 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 TPP1O14773 563 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 ARPC2O15144 300 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 ADAM12O43184 909 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RASGRP1O95267 797 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 ANGPTL1O95841 491 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RPLP0P05388 317 aaKnown RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 SPI1P17947 270 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 TGFBR1P36897 503 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 GPX4P36969 197 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 LIPAP38571 399 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 MAP2K4P45985 399 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 MASP1P48740 699 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 VEGFBP49765 207 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 YWHAHQ04917 246 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 CDK5R2Q13319 367 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 PON3Q15166 354 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 OTUD3Q5T2D3 398 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 USP53Q70EK8 1073 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 CARFQ8N187 725 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 SETD9Q8NE22 299 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RDH11Q8TC12 318 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 BPIFB1Q8TDL5 484 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 ZNF296Q8WUU4 475 aaPredicted RBP12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 EDARADDQ8WWZ3 215 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 CSPG4P5Q96PW8 444 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RBP7Q96R05 134 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 ACOX2Q99424 681 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RTP3Q9BQQ7 232 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 SAGE1Q9NXZ1 904 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 RNF6Q9Y252 685 aa12.25□□□□□ -0.45
RTFDC1-207ENST00000477573 HTTP42858 3142 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 A0A1W2PP18 115 aa12.24□□□□□ -0.45
RTFDC1-207ENST00000477573 TCRBV5S2A0A599 114 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms