RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PRSS56P0CW18 603 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 KRT3P12035 628 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 RBMS1P29558 406 aaKnown RBP5.26□□□□□ -1.57
VPS50-212ENST00000476413 SRD5A2P31213 254 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 CDKN1AP38936 164 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 CETN2P41208 172 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 FKBP1BP68106 108 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 MYL7Q01449 175 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 TRIM29Q14134 588 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 PKN2Q16513 984 aaKnown RBP5.26□□□□□ -1.57
VPS50-212ENST00000476413 GTDC1Q4AE62 458 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 ZNF542PQ5EBM4 170 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 ZNF790Q6PG37 636 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 BTN2A1Q7KYR7 527 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 COX8CQ7Z4L0 72 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 PRSS42Q7Z5A4 293 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 DCUN1D3Q8IWE4 304 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 ZC3H3Q8IXZ2 948 aaKnown RBP5.26□□□□□ -1.57
VPS50-212ENST00000476413 GBP7Q8N8V2 638 aaPredicted RBP5.26□□□□□ -1.57
VPS50-212ENST00000476413 ST7LQ8TDW4 575 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 C5orf30Q96GV9 206 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 PGLYRP2Q96PD5 576 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 TRIM7Q9C029 511 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 CUEDC2Q9H467 287 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 RNF121Q9H920 327 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS50-212ENST00000476413 C19orf25Q9UFG5 118 aaPredicted RBP5.26□□□□□ -1.57
VPS50-212ENST00000476413 IL36AQ9UHA7 158 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 PRDM4Q9UKN5 801 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 NSG2Q9Y328 171 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 LRP12Q9Y561 859 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 TEX264Q9Y6I9 313 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 GPRASP1Q5JY77 1395 aa5.26□□□□□ -1.57
VPS50-212ENST00000476413 A0A087WUV0 522 aaPredicted RBP5.25□□□□□ -1.57
VPS50-212ENST00000476413 EME2A4GXA9 379 aaPredicted RBP5.25□□□□□ -1.57
VPS50-212ENST00000476413 EPHB6O15197 1021 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 TEX28O15482 410 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 CRCPO75575 148 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 SEC24AO95486 1093 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 VTNP04004 478 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 PATE4P0C8F1 98 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 THEGLP0DJG4 465 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 RPP38P78345 283 aaKnown RBP5.25□□□□□ -1.57
VPS50-212ENST00000476413 HNRNPA0Q13151 305 aaKnown RBP5.25□□□□□ -1.57
VPS50-212ENST00000476413 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS50-212ENST00000476413 ARHGEF16Q5VV41 709 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 TRMT1LQ7Z2T5 733 aaKnown RBP5.25□□□□□ -1.57
VPS50-212ENST00000476413 SERPINA12Q8IW75 414 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 DCLK2Q8N568 766 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 ARL10Q8N8L6 244 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 CLEC1AQ8NC01 280 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 OR4C15Q8NGM1 316 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 FAM46BQ96A09 425 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 INPP4AQ96PE3 977 aaPredicted RBP5.25□□□□□ -1.57
VPS50-212ENST00000476413 LPAR4Q99677 370 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 AKIRIN1Q9H9L7 192 aaPredicted RBP5.25□□□□□ -1.57
VPS50-212ENST00000476413 MAN2C1Q9NTJ4 1040 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 FBXL4Q9UKA2 621 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 C2CD2Q9Y426 696 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 DISP3Q9P2K9 1392 aa5.25□□□□□ -1.57
VPS50-212ENST00000476413 FAM149AA5PLN7 773 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 IFITM10A6NMD0 228 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 BLOC1S5-TXNDC5H3BN57 136 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 PGRMC2O15173 223 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 EXTL3O43909 919 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 CDC123O75794 336 aaPredicted RBP5.24□□□□□ -1.57
VPS50-212ENST00000476413 AP2A2O94973 939 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 CAVIN2O95810 425 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 EML2O95834 649 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 RAF1P04049 648 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 SBK2P0C263 348 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 ELAVL4P26378 380 aaKnown RBP5.24□□□□□ -1.57
VPS50-212ENST00000476413 LBX1P52954 281 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 CETN1Q12798 172 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 TRA2AQ13595 282 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS50-212ENST00000476413 ZNF74Q16587 644 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 RUSC1-AS1Q66K80 236 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 DHRS11Q6UWP2 260 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 SLC24A5Q71RS6 500 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 LAX1Q8IWV1 398 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 GPC2Q8N158 579 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 CHCHD4Q8N4Q1 142 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 FAM89BQ8N5H3 189 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 OR8H1Q8NGG4 311 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 ATP6V0A1Q93050 837 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 NXPE2Q96DL1 559 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 NEDD4LQ96PU5 975 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 IDI2Q9BXS1 227 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 PDRG1Q9NUG6 133 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 PANK4Q9NVE7 773 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 TBC1D13Q9NVG8 400 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 MIS18AQ9NYP9 233 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 AKAP7Q9P0M2 348 aaPredicted RBP5.24□□□□□ -1.57
VPS50-212ENST00000476413 PROCRQ9UNN8 238 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 TMED7Q9Y3B3 224 aa5.24□□□□□ -1.57
VPS50-212ENST00000476413 A0A0G2JLW4 131 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 TRBV4-1A0A0J9YWV2 114 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 MAGEB16A2A368 324 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 MLNRO43193 412 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms