RNA–Protein interactions for RNA: ENST00000473039.5

DENND1A-206, Transcript of DENN domain containing 1A, human

TSL 1 (best)

Gene DENND1A, Length 4,800 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND1A-206	ENST00000473039	PCDHGB5	Q9Y5G0	923 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	COL2A1	P02458	1487 aa	Predicted RBP	11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	SLC9A3R1	O14745	358 aa	Predicted RBP	11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	REM1	O75628	298 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	GABRB3	P28472	473 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	ERP29	P30040	261 aa	Known RBP	11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	DPP6	P42658	865 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	KCNQ1	P51787	676 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	ADAM15	Q13444	863 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	CCL14	Q16627	93 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	KAT2A	Q92830	837 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	ISL2	Q96A47	359 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	PLD4	Q96BZ4	506 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	SIPA1	Q96FS4	1042 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	FEV	Q99581	238 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	DOHH	Q9BU89	302 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	MRO	Q9BYG7	248 aa		11.13	□□□□□ -0.63
DENND1A-206	ENST00000473039	AGAP5	A6NIR3	686 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	PRMT3	O60678	531 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ADH1A	P07327	375 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	SELP	P16109	830 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	SHMT2	P34897	504 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CTNNB1	P35222	781 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	MAP2K3	P46734	347 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CLDN8	P56748	225 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CCDC36	Q8IYA8	594 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	PSKH2	Q96QS6	385 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	FAM129B	Q96TA1	746 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	RACGAP1	Q9H0H5	632 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	SYNDIG1	Q9H7V2	258 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	TREX1	Q9NSU2	369 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	SLC45A1	Q9Y2W3	748 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CLCA3P	Q9Y6N3	262 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039		A0A1B0GTW7	788 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ZSCAN5B	A6NJL1	495 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	MID1	O15344	667 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CBSL	P0DN79	551 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	RYK	P34925	604 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CBS	P35520	551 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	OMP	P47874	163 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	SPHAR	Q15513	63 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	GTDC1	Q4AE62	458 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	VTCN1	Q7Z7D3	282 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	NETO1	Q8TDF5	533 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	MAEL	Q96JY0	434 aa	Known RBP	11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CD300A	Q9UGN4	299 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CLCA1	A8K7I4	914 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	SLC10A3	P09131	477 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	SAG	P10523	405 aa	Predicted RBP	11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CKMT1A	P12532	417 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ZNF10	P21506	573 aa	Predicted RBP	11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	PPIG	Q13427	754 aa	Known RBP eCLIP	11.12	□□□□□ -0.63	4e-7	■■□□□ 11.9
DENND1A-206	ENST00000473039	KEAP1	Q14145	624 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	MPPE1	Q53F39	396 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ADGRF1	Q5T601	910 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	KIAA1161	Q6NSJ0	714 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	KLHL36	Q8N4N3	616 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CCSER2	Q9H7U1	834 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	IL1RAP	Q9NPH3	570 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	GPR83	Q9NYM4	423 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ZNF780B	Q9Y6R6	833 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ISM1	B1AKI9	464 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ARNTL	O00327	626 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	PITPNM1	O00562	1244 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	ZNF195	O14628	629 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	PRL	P01236	227 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CPN2	P22792	545 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	HTR1B	P28222	390 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	VEGFB	P49765	207 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	CCDC157	Q569K6	752 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	AGAP7P	Q5VUJ5	663 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	LRRC66	Q68CR7	880 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	HMBOX1	Q6NT76	420 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	PSAPL1	Q6NUJ1	521 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	EFCAB11	Q9BUY7	163 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	IGFLR1	Q9H665	355 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	PCDHB14	Q9Y5E9	798 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	STON1	Q9Y6Q2	735 aa		11.12	□□□□□ -0.63
DENND1A-206	ENST00000473039	FAM47E-STBD1	D6RA91	191 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	SAP18	O00422	153 aa	Known RBP	11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	SMS	P52788	366 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	CXCR4	P61073	352 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	KCNC4	Q03721	635 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	ZNF311	Q5JNZ3	666 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	BEND5	Q7L4P6	421 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	CFAP206	Q8IYR0	622 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	TNFAIP8L1	Q8WVP5	186 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	CHIA	Q9BZP6	476 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	DPAGT1	Q9H3H5	408 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	GORASP2	Q9H8Y8	452 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	DCAF13	Q9NV06	445 aa	Known RBP	11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	RDH8	Q9NYR8	311 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	PDPK1	O15530	556 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	CLDN7	O95471	211 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	TGFB1	P01137	390 aa		11.11	□□□□□ -0.63
DENND1A-206	ENST00000473039	SLC35G4	P0C7Q5	338 aa		11.11	□□□□□ -0.63

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