RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PLSCR5A0PG75 271 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 SLC33A1O00400 549 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 FAM58BPP0C7Q3 252 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 INHBCP55103 352 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 SNU13P55769 128 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 CLDN2P57739 230 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 SCARB2Q14108 478 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 NDUFA5Q16718 116 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ADNP2Q6IQ32 1131 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PYHIN1Q6K0P9 492 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 FAM86B1Q8N7N1 296 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 DDHD1Q8NEL9 900 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 OR5T2Q8NGG2 359 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 DDIT4LQ96D03 193 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 NXPE2Q96DL1 559 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ZC3HAV1LQ96H79 300 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 UBXN10Q96LJ8 280 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 EIF2B3Q9NR50 452 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 C1orf109Q9NX04 203 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 THUMPD1Q9NXG2 353 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 MS4A12Q9NXJ0 267 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 CRNNQ9UBG3 495 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 VSTM2BA6NLU5 285 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 H7BY64 318 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 STARP49675 285 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 AFF3P51826 1226 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 ZNF460Q14592 562 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 PGBD2Q6P3X8 592 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 PLD5Q8N7P1 536 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 UCN3Q969E3 161 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 LRRC58Q96CX6 371 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 PRAP1Q96NZ9 151 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 EDEM2Q9BV94 578 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 MFRPQ9BY79 579 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 ARL8BQ9NVJ2 186 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 SPATA7Q9P0W8 599 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 A0A1B0GTW7 788 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 TGFB1I1O43294 461 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 GABRB2P47870 512 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 NRF1Q16656 503 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 VWA2Q5GFL6 755 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 SLC25A25Q6KCM7 469 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 LRRC70Q7Z2Q7 622 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 PARP8Q8N3A8 854 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 KREMEN1Q96MU8 473 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 VPS29Q9UBQ0 182 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 SORCS3Q9UPU3 1222 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 AREL1O15033 823 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 RPLP0P05388 317 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 COX4I1P13073 169 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 CDH12P55289 794 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 RAB33AQ14088 237 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 SWI5Q1ZZU3 235 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 C5orf22Q49AR2 442 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 CCSAPQ6IQ19 270 aaPredicted RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 LCTLQ6UWM7 567 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 AGBL5Q8NDL9 886 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 OR56A1Q8NGH5 318 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 COX4I2Q96KJ9 171 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 ANKRD66B4E2M5 251 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 LATO43561 262 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 PIAS1O75925 651 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 CSNK1EP49674 416 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 DIO3P55073 304 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 MRPS21P82921 87 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 NPRL3Q12980 569 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 SYT16Q17RD7 645 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 SLC35G1Q2M3R5 365 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 TMEM53Q6P2H8 277 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 TMIGD1Q6UXZ0 262 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 TRAM1L1Q8N609 369 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 ZNF570Q96NI8 536 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 MMADHCQ9H3L0 296 aaPredicted RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 MINDY3Q9H8M7 445 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 MAGEL2Q9UJ55 1249 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 MROH1Q8NDA8 1641 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 ARHGEF28Q8N1W1 1705 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 A0A0D9SEW6 157 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 A0A1B0GVT2 93 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 FAM172BPA6NC97 362 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 PABPC4LP0CB38 370 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 ADRB3P13945 408 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 PTPN4P29074 926 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 RPS13P62277 151 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 CHRNEQ04844 493 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 CDKAL1Q5VV42 579 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 Q6ZVL8 140 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 TMEM25Q86YD3 366 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 CPSF7Q8N684 471 aaKnown RBP8.31□□□□□ -1.08
CD47-204ENST00000471694 ZNF610Q8N9Z0 462 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 MFSD2AQ8NA29 543 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 POC5Q8NA72 575 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 VNN3Q9NY84 501 aa8.31□□□□□ -1.08
CD47-204ENST00000471694 MMP8P22894 467 aa8.3□□□□□ -1.08
CD47-204ENST00000471694 TARDBPQ13148 414 aaKnown RBP eCLIP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms