RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DLG3Q92796 817 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 FAM136AQ96C01 138 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 PDLIM5Q96HC4 596 aaKnown RBP8.67□□□□□ -1.02
SF3A1-206ENST00000471037 UBXN10Q96LJ8 280 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 CSMD1Q96PZ7 3565 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 SPSB2Q99619 263 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 DERL2Q9GZP9 239 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 IQCGQ9H095 443 aaKnown RBP8.67□□□□□ -1.02
SF3A1-206ENST00000471037 SLC26A1Q9H2B4 701 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 SLC6A20Q9NP91 592 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ENAMQ9NRM1 1142 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 FAM53CQ9NYF3 392 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 GRID1Q9ULK0 1009 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 CSAG2Q9Y5P2 127 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 CRYBG3Q68DQ2 2970 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 TMEM120BA0PK00 339 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 SOCS6O14544 535 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 LRRTM2O43300 516 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 HNRNPRO43390 633 aaKnown RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 GPC4O75487 556 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 KLHL2O95198 593 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 ZWINTO95229 277 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 CCDC166P0CW27 439 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 CREB1P16220 341 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 MAGP20916 626 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 HPDP32754 393 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 ARSFP54793 590 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 PPP2R2AP63151 447 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 CSHL1Q14406 222 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 ZNF169Q14929 603 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 ZRSR2Q15696 482 aaKnown RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 NKG7Q16617 165 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 SYTL3Q4VX76 610 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 AGAP7PQ5VUJ5 663 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 YOD1Q5VVQ6 348 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 TMEM207Q6UWW9 146 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 NEK10Q6ZWH5 1172 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 OVCH1Q7RTY7 1134 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 CPNE9Q8IYJ1 553 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 CENPLQ8N0S6 344 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 DNAJB14Q8TBM8 379 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 GRHL3Q8TE85 626 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 KCTD4Q8WVF5 259 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 FAR1Q8WVX9 515 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 LINGO1Q96FE5 620 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 AGAP4Q96P64 663 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 SLC30A3Q99726 388 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 SLX1AQ9BQ83 275 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 SELENOSQ9BQE4 189 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 CNOT10Q9H9A5 744 aaKnown RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 NMRAL1Q9HBL8 299 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 KCNK9Q9NPC2 374 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 NKIRAS1Q9NYS0 192 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 GALPQ9UBC7 116 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 MID2Q9UJV3 735 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 FBXL4Q9UKA2 621 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 NXT1Q9UKK6 140 aaKnown RBP8.66□□□□□ -1.02
SF3A1-206ENST00000471037 PLLPQ9Y342 182 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 HS3ST3B1Q9Y662 390 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 CROCCQ5TZA2 2017 aa8.66□□□□□ -1.02
SF3A1-206ENST00000471037 ISM1B1AKI9 464 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 DSCR3O14972 297 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 SPAG7O75391 227 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 SLCO2B1O94956 709 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 TSPAN12O95859 305 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 STSP08842 583 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 RBP1P09455 135 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 MPC1LP0DKB6 136 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 PIM1P11309 404 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-206ENST00000471037 ALAS2P22557 587 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 ELAVL4P26378 380 aaKnown RBP8.65□□□□□ -1.02
SF3A1-206ENST00000471037 PKLRP30613 574 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 RAB28P51157 221 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 PGGT1BP53609 377 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 IRF9Q00978 393 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 HSPA14Q0VDF9 509 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 ACAP2Q15057 778 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 TLR1Q15399 786 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 TUBB8Q3ZCM7 444 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 CCDC153Q494R4 210 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 ACSBG2Q5FVE4 666 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 IRAK1BP1Q5VVH5 260 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 FCRL6Q6DN72 434 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 RPUSD3Q6P087 351 aaKnown RBP8.65□□□□□ -1.02
SF3A1-206ENST00000471037 KIRREL2Q6UWL6 708 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 TTLL10Q6ZVT0 673 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 COX15Q7KZN9 410 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 MYO1HQ8N1T3 1032 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 PLD6Q8N2A8 252 aaKnown RBP8.65□□□□□ -1.02
SF3A1-206ENST00000471037 LINC01555Q8NAE3 123 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 FAM76AQ8TAV0 307 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 TCP10LQ8TDR4 215 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 ANKRD49Q8WVL7 239 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 MARVELD3Q96A59 401 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 NXNL1Q96CM4 212 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 VPS50Q96JG6 964 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 ZNF285Q96NJ3 590 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 MENTQ9BUN1 341 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 LHPPQ9H008 270 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 EPS8L2Q9H6S3 715 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms