RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MFSD9Q8NBP5 474 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 OR5T3Q8NGG3 340 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 DNAJB8Q8NHS0 232 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 LINGO1Q96FE5 620 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 SNF8Q96H20 258 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 PEX11GQ96HA9 241 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 ZNF354BQ96LW1 612 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 SGPP1Q9BX95 441 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 RNF32Q9H0A6 362 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 PPANQ9NQ55 473 aaKnown RBP12.53□□□□□ -0.4
CPSF4-210ENST00000469897 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 SLC17A6Q9P2U8 582 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 SEC14L3Q9UDX4 400 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 C19orf25Q9UFG5 118 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-210ENST00000469897 TEKT2Q9UIF3 430 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 FER1L5A0AVI2 2057 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 ESPL1Q14674 2120 aa12.52□□□□□ -0.4
CPSF4-210ENST00000469897 GOLGA6L10A0A0M3HER8 536 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ARHGAP10A1A4S6 786 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ZNF860A6NHJ4 632 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 DNALI1O14645 258 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-210ENST00000469897 CDC123O75794 336 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-210ENST00000469897 TTC4O95801 387 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 GUCA1CO95843 209 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 B3GALT4O96024 378 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 CRYABP02511 175 aaKnown RBP12.52□□□□□ -0.41
CPSF4-210ENST00000469897 SERPIND1P05546 499 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 CCND1P24385 295 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 CD96P40200 585 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 IL2P60568 153 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 PMP22Q01453 160 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ACTN3Q08043 901 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-210ENST00000469897 SP140Q13342 867 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 NSDHLQ15738 373 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 INAQ16352 499 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 BBS9Q3SYG4 887 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ZNF766Q5HY98 468 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ACER2Q5QJU3 275 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 CATSPEREQ5SY80 951 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 TEDDM1Q5T9Z0 273 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 SRRM1Q8IYB3 904 aaKnown RBP12.52□□□□□ -0.41
CPSF4-210ENST00000469897 SLC34A3Q8N130 599 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 BEST3Q8N1M1 668 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 PWWP2AQ96N64 755 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 HAUS8Q9BT25 410 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 RBCK1Q9BYM8 510 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 DDX47Q9H0S4 455 aaKnown RBP12.52□□□□□ -0.41
CPSF4-210ENST00000469897 KCNK13Q9HB14 408 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ARL15Q9NXU5 204 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ABI3Q9P2A4 366 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 COPG2Q9UBF2 871 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 ASIC3Q9UHC3 531 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 VWA7Q9Y334 891 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 SLC22A7Q9Y694 548 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 UNC79Q9P2D8 2635 aa12.52□□□□□ -0.41
CPSF4-210ENST00000469897 PRSS44E7EML9 344 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 CCL21O00585 134 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 NDUFS4O43181 175 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 MAN1A2O60476 641 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 TSPAN12O95859 305 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 SLC35G6P0C7Q6 338 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 AGTR2P50052 363 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 CCR8P51685 355 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
CPSF4-210ENST00000469897 TUBA3CQ13748 450 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 SFT2D3Q587I9 215 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 SPINK14Q6IE38 97 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 TUBA3EQ6PEY2 450 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 PCGF5Q86SE9 256 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 CRLF3Q8IUI8 442 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 CNTN4Q8IWV2 1026 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 ZNF740Q8NDX6 193 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 PLPP5Q8NEB5 264 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 ABHD11Q8NFV4 315 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 OR4K1Q8NGD4 311 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 GABPB2Q8TAK5 448 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-210ENST00000469897 M1APQ8TC57 530 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 CERS2Q96G23 380 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 SIGLEC12Q96PQ1 595 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 OR4K3Q96R72 315 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 NAT9Q9BTE0 207 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 TRIM54Q9BYV2 358 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 FAM129AQ9BZQ8 928 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 PLAC1Q9HBJ0 212 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 KLHL1Q9NR64 748 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 TRMT1Q9NXH9 659 aaKnown RBP12.51□□□□□ -0.41
CPSF4-210ENST00000469897 SH3BGRL2Q9UJC5 107 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 IKZF3Q9UKT9 509 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 ICE1Q9Y2F5 2266 aa12.51□□□□□ -0.41
CPSF4-210ENST00000469897 CHST10O43529 356 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 B4GALT2O60909 372 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 CYC1P08574 325 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 PRF1P14222 555 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 IVDP26440 423 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 HNF4AP41235 474 aa12.5□□□□□ -0.41
CPSF4-210ENST00000469897 ELK3P41970 407 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms