RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 DSCR3O14972 297 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 NDUFS4O43181 175 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TYROBPO43914 113 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 UGDHO60701 494 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SPAG7O75391 227 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SUPT7LO94864 414 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ONECUT2O95948 504 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SERPIND1P05546 499 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SLC35G6P0C7Q6 338 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 MYZAPP0CAP1 466 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 CPA3P15088 417 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TCN2P20062 427 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 IMPDH1P20839 514 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ITPKBP27987 946 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 GSTM2P28161 218 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 CDH13P55290 713 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TLE3Q04726 772 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 RGS1Q08116 209 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SRSF6Q13247 344 aaKnown RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 FAM53BQ14153 422 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 HIST2H2ACQ16777 129 aaPredicted RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 NDUFA9Q16795 377 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ST3GAL2Q16842 350 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 UNC50Q53HI1 259 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 LIPJQ5W064 366 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 HIST2H2AA3Q6FI13 130 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TMEM214Q6NUQ4 689 aaKnown RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 FAM199XQ6PEV8 388 aaPredicted RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 VASH2Q86V25 355 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 EXOC3L1Q86VI1 746 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TRPV3Q8NET8 790 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 NT5CQ8TCD5 201 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TCP10LQ8TDR4 215 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 CREB3L4Q8TEY5 395 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 PPP4R1Q8TF05 950 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ZNF483Q8TF39 744 aaPredicted RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 UBE2E3Q969T4 207 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ATP6V1E2Q96A05 226 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 KIAA1143Q96AT1 154 aaPredicted RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 SEC16BQ96JE7 1060 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 NSUN5Q96P11 429 aaKnown RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 CCNL2Q96S94 520 aaPredicted RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 EFHD1Q9BUP0 239 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ACTR8Q9H981 624 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 CROTQ9UKG9 612 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ZNF490Q9ULM2 529 aaPredicted RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ACTL7BQ9Y614 415 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ANKRD12Q6UB98 2062 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ADAMTS20P59510 1910 aa11.38□□□□□ -0.59
VPS13D-204ENST00000469054 TPRP12270 2363 aaKnown RBP11.38□□□□□ -0.59
VPS13D-204ENST00000469054 ANKDD1BA6NHY2 528 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 GOLGA6L10A6NI86 522 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 C21orf140B9A014 251 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 OR7A17O14581 309 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 TERTO14746 1132 aaKnown RBP11.37□□□□□ -0.59
VPS13D-204ENST00000469054 EFSO43281 561 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 FOXS1O43638 330 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 CLEC3AO75596 197 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 SNRNP200O75643 2136 aaKnown RBP11.37□□□□□ -0.59
VPS13D-204ENST00000469054 SERPINA6P08185 405 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 PIM1P11309 404 aaPredicted RBP11.37□□□□□ -0.59
VPS13D-204ENST00000469054 LIFP15018 202 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 F8A1P23610 371 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 DLSTP36957 453 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 HNF4AP41235 474 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 OR1D4P47884 311 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 CCNG1P51959 295 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 CYP4F2P78329 520 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 CLCQ05315 142 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 DNASE1L3Q13609 305 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 NKAIN1Q4KMZ8 207 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 BROXQ5VW32 411 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 GRHL2Q6ISB3 625 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 MED27Q6P2C8 311 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 RPS27LQ71UM5 84 aaKnown RBP11.37□□□□□ -0.59
VPS13D-204ENST00000469054 HDXQ7Z353 690 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 MYLK4Q86YV6 388 aaPredicted RBP11.37□□□□□ -0.59
VPS13D-204ENST00000469054 LAS2Q8IYD9 372 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 DTWD1Q8N5C7 304 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 METTL27Q8N6F8 245 aaPredicted RBP11.37□□□□□ -0.59
VPS13D-204ENST00000469054 L3MBTL4Q8NA19 623 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 KCT2Q8NC54 265 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 ARMC2Q8NEN0 867 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 OR52B6Q8NGF0 335 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 CT55Q8WUE5 264 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 L3HYPDHQ96EM0 354 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 MOCOSQ96EN8 888 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 MVB12AQ96EY5 273 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 FAM111AQ96PZ2 611 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 C17orf62Q9BQA9 187 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 NTMT1Q9BV86 223 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 GPR87Q9BY21 358 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 DRC3Q9H069 523 aa11.37□□□□□ -0.59
VPS13D-204ENST00000469054 STMN4Q9H169 189 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms