RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TO15178 435 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CHMP2AO43633 222 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 FAM20BO75063 409 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 PMPCBO75439 489 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CLN5O75503 358 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 EEDO75530 441 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 BANF1O75531 89 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 STX11O75558 287 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SC5DO75845 299 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CCNB2O95067 398 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ZBTB7AO95365 584 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 MT-CO1P00395 513 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 GH2P01242 217 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 PRKCGP05129 697 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 APRTP07741 180 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ADRB1P08588 477 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 FGF4P08620 206 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 HNRNPCL4P0DMR1 293 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TYRP14679 529 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SPI1P17947 270 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 HK1P19367 917 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 XPAP23025 273 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SLC6A2P23975 617 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 GTF2E2P29084 291 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CHRNA5P30532 468 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CALCRP30988 508 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SDC4P31431 198 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 FMO4P31512 558 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CA5AP35218 305 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TGFBR2P37173 567 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TSPAN7P41732 249 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 GRIA1P42261 906 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 MAPK9P45984 424 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 BRCC3P46736 316 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 RFX2P48378 723 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CLCN3P51790 818 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 NR0B1P51843 470 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 MAPK10P53779 464 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 BCAR1P56945 870 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 KCNK10P57789 538 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ERVFC1P60507 584 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 AP1S1P61966 158 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TSPAN5P62079 268 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 NCS1P62166 190 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 IL5RAQ01344 420 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SLC25A11Q02978 314 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 EMX2Q04743 252 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 KRTAP1-1Q07627 177 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 KCNAB2Q13303 367 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 PEX6Q13608 980 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 RPS6KA2Q15349 733 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SNRNP35Q16560 246 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 MEP1AQ16819 746 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 PFKFB4Q16877 469 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TATDN3Q17R31 274 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 IMPG1Q17R60 797 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TIGD6Q17RP2 521 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 EIF2S3LQ2VIR3 472 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 C2CD6Q53TS8 623 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TRIM61Q5EBN2 209 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 DNLZQ5SXM8 178 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TRIQKQ629K1 86 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 B3GNTL1Q67FW5 361 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 GLYATQ6IB77 296 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ANKRD54Q6NXT1 300 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 FAM180BQ6P0A1 224 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TATDN1Q6P1N9 297 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 UQCC3Q6UW78 93 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 C5orf46Q6UWT4 87 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 RTL4Q6ZR62 310 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SLC26A9Q7LBE3 791 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 KDELC2Q7Z4H8 507 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SLC9B2Q86UD5 537 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ZC3HC1Q86WB0 502 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM17Q86X19 198 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 NAXDQ8IW45 347 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CAMKK1Q8N5S9 505 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CLDN22Q8N7P3 220 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 UXS1Q8NBZ7 420 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 NAXEQ8NCW5 288 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 OR8J3Q8NGG0 315 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CRYGNQ8WXF5 182 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CPA5Q8WXQ8 436 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ADAMTS14Q8WXS8 1223 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 LPAR1Q92633 364 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TMBIM1Q969X1 311 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 REPS1Q96D71 796 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CERS2Q96G23 380 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM41AQ96HV5 264 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 FUBP3Q96I24 572 aaKnown RBP eCLIP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 Q96MT0 163 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TOX2Q96NM4 488 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 FYTTD1Q96QD9 318 aaKnown RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 OR5M11Q96RB7 305 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 RIT2Q99578 217 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 P2RY13Q9BPV8 354 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF670Q9BS34 389 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CRB3Q9BUF7 120 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 MENTQ9BUN1 341 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 HDHD5Q9BXW7 423 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms