RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TIAL1Q01085 375 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL9A3-207ENST00000467819 CRYMQ14894 314 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 SP5Q6BEB4 398 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-207ENST00000467819 PLAG1Q6DJT9 500 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 TMEM207Q6UWW9 146 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 ASPGQ86U10 573 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 SLC26A11Q86WA9 606 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 PPIL6Q8IXY8 311 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 BEST3Q8N1M1 668 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 MYO1HQ8N1T3 1032 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 C2CD4AQ8NCU7 369 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-207ENST00000467819 KCNK13Q9HB14 408 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 PARVBQ9HBI1 364 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 TAS2R13Q9NYV9 303 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 SH3BGRL2Q9UJC5 107 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 JRKLQ9Y4A0 524 aa19.88■□□□□ 0.77
COL9A3-207ENST00000467819 ZNF860A6NHJ4 632 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 PGRMC1O00264 195 aaKnown RBP19.87■□□□□ 0.77
COL9A3-207ENST00000467819 CYC1P08574 325 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 PRF1P14222 555 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 PGAM1P18669 254 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 TNFRSF8P28908 595 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 ZNF766Q5HY98 468 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 RBM20Q5T481 1227 aaKnown RBP19.87■□□□□ 0.77
COL9A3-207ENST00000467819 CAPN13Q6MZZ7 669 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-207ENST00000467819 PAQR3Q6TCH7 311 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 PDSS2Q86YH6 399 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 DNAJB8Q8NHS0 232 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 SLC13A3Q8WWT9 602 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 TM4SF19Q96DZ7 209 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 LINGO1Q96FE5 620 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 ZNF354BQ96LW1 612 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 NAP1L3Q99457 506 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-207ENST00000467819 SUCOQ9UBS9 1254 aaKnown RBP19.87■□□□□ 0.77
COL9A3-207ENST00000467819 NAALAD2Q9Y3Q0 740 aa19.87■□□□□ 0.77
COL9A3-207ENST00000467819 BANF1O75531 89 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 CDC123O75794 336 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-207ENST00000467819 SLC35G6P0C7Q6 338 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 CCND1P24385 295 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 GRK3P35626 688 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 AGTR2P50052 363 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 CDKN2DP55273 166 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 MEF2AQ02078 507 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-207ENST00000467819 SP140Q13342 867 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 PHKG1Q16816 387 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 ACER2Q5QJU3 275 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 LCTLQ6UWM7 567 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 GRK7Q8WTQ7 553 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 ITLN2Q8WWU7 325 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-207ENST00000467819 PEX11GQ96HA9 241 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 SGPP1Q9BX95 441 aa19.86■□□□□ 0.77
COL9A3-207ENST00000467819 UNKQ9C0B0 810 aaKnown RBP19.86■□□□□ 0.77
COL9A3-207ENST00000467819 PKDREJQ9NTG1 2253 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 CCL21O00585 134 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 NRDCO43847 1150 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 GABRB3P28472 473 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 DHX9Q08211 1270 aaKnown RBP19.85■□□□□ 0.77
COL9A3-207ENST00000467819 NAA30Q147X3 362 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-207ENST00000467819 ABRAXAS2Q15018 415 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 PPP1R7Q15435 360 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 SFT2D3Q587I9 215 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 RNASEH2BQ5TBB1 312 aaKnown RBP19.85■□□□□ 0.77
COL9A3-207ENST00000467819 PAPD4Q6PIY7 484 aaKnown RBP19.85■□□□□ 0.77
COL9A3-207ENST00000467819 CRLF3Q8IUI8 442 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 MFSD9Q8NBP5 474 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 OR5T3Q8NGG3 340 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 PYCR2Q96C36 320 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 CCDC120Q96HB5 630 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 ANKRD10Q9NXR5 420 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 SLC17A6Q9P2U8 582 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 GTF3C1Q12789 2109 aa19.85■□□□□ 0.77
COL9A3-207ENST00000467819 PABPN1LA6NDY0 278 aaKnown RBP19.84■□□□□ 0.77
COL9A3-207ENST00000467819 SLC16A5O15375 505 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 WISP2O76076 250 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 HIST1H2AGP0C0S8 130 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-207ENST00000467819 NPPBP16860 134 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 HIST1H2ADP20671 130 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 GRNP28799 593 aaKnown RBP19.84■□□□□ 0.77
COL9A3-207ENST00000467819 CA7P43166 264 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 FNTAP49354 379 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 RHAGQ02094 409 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 RBPJQ06330 500 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 ACTN3Q08043 901 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-207ENST00000467819 TUBA3CQ13748 450 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 NSDHLQ15738 373 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 EXT1Q16394 746 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 H3F3CQ6NXT2 135 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 TUBA3EQ6PEY2 450 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 GABPB2Q8TAK5 448 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-207ENST00000467819 M1APQ8TC57 530 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 TSLPQ969D9 159 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 HIST1H2AHQ96KK5 128 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 SIGLEC12Q96PQ1 595 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 NPAS2Q99743 824 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 HIST1H2AJQ99878 128 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 HAUS8Q9BT25 410 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 H2AFJQ9BTM1 129 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 HES7Q9BYE0 225 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 FAM129AQ9BZQ8 928 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 KLHL1Q9NR64 748 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms