RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MIPOL1Q8TD10 442 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 STAMBPL1Q96FJ0 436 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 LINC00615Q96LM1 132 aaPredicted RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 ZNF560Q96MR9 790 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ZNF830Q96NB3 372 aaPredicted RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 CDRT15Q96T59 188 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ZBTB18Q99592 522 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 RAD9AQ99638 391 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 OSBPL8Q9BZF1 889 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 GPR88Q9GZN0 384 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 THAP2Q9H0W7 228 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PNNQ9H307 717 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 EHD1Q9H4M9 534 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 XKR8Q9H6D3 395 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ZNF696Q9H7X3 374 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 NOL11Q9H8H0 719 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 GORASP2Q9H8Y8 452 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 TRPC7Q9HCX4 862 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PALMDQ9NP74 551 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 HOMER3Q9NSC5 361 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 FARSBQ9NSD9 589 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 OLAHQ9NV23 265 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SETD4Q9NVD3 440 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 DNAJC11Q9NVH1 559 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 TRIM10Q9UDY6 481 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 TRMT6Q9UJA5 497 aaKnown RBP3.5□□□□□ -1.85
VPS50-209ENST00000467326 TSPAN16Q9UKR8 245 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 PLAGL1Q9UM63 463 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 ZNF148Q9UQR1 794 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 NAALAD2Q9Y3Q0 740 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 TEX264Q9Y6I9 313 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 SPACA6W5XKT8 324 aa3.5□□□□□ -1.85
VPS50-209ENST00000467326 A0A087WZY1 265 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 A0A1W2PPI3 338 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 ELOVL7A1L3X0 281 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 CETN3O15182 167 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 PLPP2O43688 288 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 MED24O75448 989 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 WISP2O76076 250 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 CELF2O95319 508 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 PTBP3O95758 552 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 BCL10O95999 233 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 GH1P01241 217 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 AMBPP02760 352 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 HIST1H2ABP04908 130 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 POLR2MP0CAP2 368 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 C8orf89P0DMQ9 161 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 DLATP10515 647 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 HSPA8P11142 646 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 KRT3P12035 628 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 MMP9P14780 707 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 PFKFB1P16118 471 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 VCLP18206 1134 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 HIST1H2ADP20671 130 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 ATP12AP54707 1039 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 MTTPP55157 894 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 PMP22Q01453 160 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 SPIBQ01892 262 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 MBTD1Q05BQ5 628 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 MZT1Q08AG7 82 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 PLD1Q13393 1074 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 PTPRCAPQ14761 206 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 MVPQ14764 893 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 KIR2DS3Q14952 304 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 CCDC6Q16204 474 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 DPYSL2Q16555 572 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 KRT71Q3SY84 523 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 RAB6CQ53S08 254 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 WDR38Q5JTN6 314 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 TCTE1Q5JU00 501 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 RARS2Q5T160 578 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 SPOUT1Q5T280 376 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 KLC3Q6P597 504 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 METAP1DQ6UB28 335 aaPredicted RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 ARSKQ6UWY0 536 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 PACS1Q6VY07 963 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 DET1Q7L5Y6 550 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 HIST3H2AQ7L7L0 130 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 LRRC70Q7Z2Q7 622 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 ABI3BPQ7Z7G0 1075 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 PHLDB2Q86SQ0 1253 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 VASH2Q86V25 355 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 ZNF410Q86VK4 478 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 ARID3BQ8IVW6 561 aaPredicted RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 SCYL3Q8IZE3 742 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 GBGT1Q8N5D6 347 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 GCSAMQ8N6F7 178 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 NIPA2Q8N8Q9 360 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 EIF1ADQ8N9N8 165 aaKnown RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 SPERTQ8NA61 448 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 SLC4A11Q8NBS3 891 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 DBF4BQ8NFT6 615 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 RDM1Q8NG50 284 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 OR10S1Q8NGN2 331 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 CFAP61Q8NHU2 1237 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 FAM76AQ8TAV0 307 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 UBLCP1Q8WVY7 318 aaPredicted RBP3.49□□□□□ -1.85
VPS50-209ENST00000467326 ROBO4Q8WZ75 1007 aa3.49□□□□□ -1.85
VPS50-209ENST00000467326 EXT2Q93063 718 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms