RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RAC3P60763 192 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 RBPJQ06330 500 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 STIM1Q13586 685 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TUBA3CQ13748 450 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 GPR18Q14330 331 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 CCNG2Q16589 344 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 RNF151Q2KHN1 245 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 IRAK1BP1Q5VVH5 260 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 ITPRIPL1Q6GPH6 555 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TRNP1Q6NT89 227 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 DUS1LQ6P1R4 473 aaKnown RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TUBA3EQ6PEY2 450 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TRIM65Q6PJ69 517 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TMCO3Q6UWJ1 677 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 SLFN11Q7Z7L1 901 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 SYTL1Q8IYJ3 562 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 SLC38A9Q8NBW4 561 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 LILRB1Q8NHL6 650 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 GABPB2Q8TAK5 448 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TRIM63Q969Q1 353 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 DHTKD1Q96HY7 919 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 VPS50Q96JG6 964 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 GBP5Q96PP8 586 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 GPHA2Q96T91 129 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 CRB3Q9BUF7 120 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 EPS8L2Q9H6S3 715 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TMEM140Q9NV12 185 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 PIH1D1Q9NWS0 290 aaKnown RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 CPSF2Q9P2I0 782 aaKnown RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 ZNF624Q9P2J8 865 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 NFKBIL1Q9UBC1 381 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 PCSK1NQ9UHG2 260 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 BLOC1S6Q9UL45 172 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 RUVBL1Q9Y265 456 aaKnown RBP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 BTRCQ9Y297 605 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 NEU2Q9Y3R4 380 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTCD3-207ENST00000467273 DMRT1Q9Y5R6 373 aa5.23□□□□□ -1.57
PTCD3-207ENST00000467273 TRGV8A0A0C4DH27 118 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 C2CD4BA6NLJ0 364 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 AGPSO00116 658 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 MATN2O00339 956 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CHUKO15111 745 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 KMOO15229 486 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 KCNJ13O60928 360 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CRYABP02511 175 aaKnown RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 KITP10721 976 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 ATP6V1B1P15313 513 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 VCLP18206 1134 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 OTX2P32243 289 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 FOLR3P41439 243 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 PIK3CBP42338 1070 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 ZNF135P52742 658 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 STC1P52823 247 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CTXN1P60606 82 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 MRPS35P82673 323 aaKnown RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 FOLH1Q04609 750 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 LTBQ06643 244 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 IL10RBQ08334 325 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 DMTNQ08495 405 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 KCNAB1Q14722 419 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CYP2A13Q16696 494 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CCDC14Q49A88 953 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 FLYWCH1Q4VC44 716 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 DNTTIP2Q5QJE6 756 aaKnown RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 LRRC66Q68CR7 880 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 DENND2CQ68D51 928 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 PDPK2PQ6A1A2 396 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 GFRALQ6UXV0 394 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 BTN2A1Q7KYR7 527 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 TRIM74Q86UV6 250 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 FAM71AQ8IYT1 594 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 KRT78Q8N1N4 520 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 BBS5Q8N3I7 341 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CCDC185Q8N715 623 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 OR5M3Q8NGP4 307 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 OR2Y1Q8NGV0 311 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 ZNF483Q8TF39 744 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 SCAMP4Q969E2 229 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 PTERQ96BW5 349 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CXorf40BQ96DE9 158 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 RNF31Q96EP0 1072 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 SGCZQ96LD1 299 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 MOGAT1Q96PD6 335 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 OR14A2Q96R54 314 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 NUDCD1Q96RS6 583 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 MAP3K3Q99759 626 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 TIMM29Q9BSF4 260 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 MLPHQ9BV36 600 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 NUP62CLQ9H1M0 184 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 PDCL3Q9H2J4 239 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 OSGEPL1Q9H4B0 414 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 ACTR5Q9H9F9 607 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 ZBTB20Q9HC78 741 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 KLC4Q9NSK0 619 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 P4HTMQ9NXG6 502 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 ABI3Q9P2A4 366 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 RPH3AQ9Y2J0 694 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CRYL1Q9Y2S2 319 aa5.22□□□□□ -1.57
PTCD3-207ENST00000467273 REXO2Q9Y3B8 237 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms