RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
SMC1A-204ENST00000463684 PCID2Q5JVF3 399 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 ZNF468Q5VIY5 522 aaPredicted RBP13.6□□□□□ -0.23
SMC1A-204ENST00000463684 PRSS41Q7RTY9 318 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 SDCCAG8Q86SQ7 713 aaPredicted RBP13.6□□□□□ -0.23
SMC1A-204ENST00000463684 MARVELD2Q8N4S9 558 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 PPFIBP2Q8ND30 876 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 PLPP5Q8NEB5 264 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 PRAP1Q96NZ9 151 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 ANKHQ9HCJ1 492 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 CCM2LQ9NUG4 571 aaPredicted RBP13.6□□□□□ -0.23
SMC1A-204ENST00000463684 KLF13Q9Y2Y9 288 aaPredicted RBP13.6□□□□□ -0.23
SMC1A-204ENST00000463684 CACNA1CQ13936 2221 aa13.6□□□□□ -0.23
SMC1A-204ENST00000463684 KIF5CO60282 957 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 PSIP1O75475 530 aaKnown RBP13.59□□□□□ -0.23
SMC1A-204ENST00000463684 SLC16A8O95907 504 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 IL10P22301 178 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 HRH2P25021 359 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 TPP2P29144 1249 aaPredicted RBP13.59□□□□□ -0.23
SMC1A-204ENST00000463684 MEOX1P50221 254 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 SLC26A5P58743 744 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 RPS15AP62244 130 aaKnown RBP13.59□□□□□ -0.23
SMC1A-204ENST00000463684 SNRPNP63162 240 aaKnown RBP13.59□□□□□ -0.23
SMC1A-204ENST00000463684 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 CTSL3PQ5NE16 218 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 ACAD11Q709F0 780 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 CCDC170Q8IYT3 715 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 SLC35B2Q8TB61 432 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 ELP5Q8TE02 316 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 FAM136AQ96C01 138 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 PANX2Q96RD6 677 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 TMEM184CQ9NVA4 438 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 DNAJB12Q9NXW2 375 aaKnown RBP13.59□□□□□ -0.23
SMC1A-204ENST00000463684 EDARQ9UNE0 448 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 HRH3Q9Y5N1 445 aa13.59□□□□□ -0.23
SMC1A-204ENST00000463684 KCNE1BA0A087WTH5 132 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 MAGEB17A8MXT2 336 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 E7ENX8 843 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 FCHO1O14526 889 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 HS6ST1O60243 411 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 NIPSNAP2O75323 286 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 CDC123O75794 336 aaPredicted RBP13.58□□□□□ -0.24
SMC1A-204ENST00000463684 SYF2O95926 243 aaKnown RBP13.58□□□□□ -0.24
SMC1A-204ENST00000463684 TFEBP19484 476 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 CYLC1P35663 651 aaPredicted RBP13.58□□□□□ -0.24
SMC1A-204ENST00000463684 HLCSP50747 726 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 ITGA8P53708 1063 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 RHAGQ02094 409 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 TAP2Q03519 686 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 PMPCAQ10713 525 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 GBX1Q14549 363 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 ACSBG2Q5FVE4 666 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 MRNIPQ6NTE8 343 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 TMEM214Q6NUQ4 689 aaKnown RBP13.58□□□□□ -0.24
SMC1A-204ENST00000463684 ARHGAP11AQ6P4F7 1023 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 CCDC71Q8IV32 467 aaPredicted RBP13.58□□□□□ -0.24
SMC1A-204ENST00000463684 SULF2Q8IWU5 870 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 SHISA5Q8N114 240 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 UBL4BQ8N7F7 174 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 CAMKVQ8NCB2 501 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 MYRIPQ8NFW9 859 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 ZNF480Q8WV37 535 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 THAP11Q96EK4 314 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 PEX11GQ96HA9 241 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 OR1F2PQ96R84 312 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 MACROD1Q9BQ69 325 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 TRIM45Q9H8W5 580 aaPredicted RBP13.58□□□□□ -0.24
SMC1A-204ENST00000463684 RAB6BQ9NRW1 208 aa13.58□□□□□ -0.24
SMC1A-204ENST00000463684 E5RI56 91 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 PEX1O43933 1283 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 RDH16O75452 317 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 PDE9AO76083 593 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 IFNB1P01574 187 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 ESR1P03372 595 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 APRTP07741 180 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 FOSL1P15407 271 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 TRHRP34981 398 aaPredicted RBP13.57□□□□□ -0.24
SMC1A-204ENST00000463684 RFC3P40938 356 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 MPP1Q00013 466 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 KLF1Q13351 362 aaPredicted RBP13.57□□□□□ -0.24
SMC1A-204ENST00000463684 CEBPEQ15744 281 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
SMC1A-204ENST00000463684 PAOXQ6QHF9 649 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 VN1R4Q7Z5H5 301 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 ZNF227Q86WZ6 799 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 KIF2BQ8N4N8 673 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 C16orf52Q8NHV5 167 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 ZCCHC10Q8TBK6 192 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 TSLPQ969D9 159 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 POLDIP3Q9BY77 421 aaKnown RBP13.57□□□□□ -0.24
SMC1A-204ENST00000463684 RBCK1Q9BYM8 510 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 GSX1Q9H4S2 264 aaPredicted RBP13.57□□□□□ -0.24
SMC1A-204ENST00000463684 DUSP10Q9Y6W6 482 aa13.57□□□□□ -0.24
SMC1A-204ENST00000463684 ABCA2Q9BZC7 2435 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 FAM237BA0A1B0GVD1 139 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 TMEM200CA6NKL6 621 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 KLK8O60259 260 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 SESN2P58004 480 aaPredicted RBP13.56□□□□□ -0.24
SMC1A-204ENST00000463684 MLF1P58340 268 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms