RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SRRM3A6NNA2 597 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-204ENST00000463487 PLIN3O60664 434 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 PROCP04070 461 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 SERPIND1P05546 499 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 CTSBP07858 339 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 TCN2P20062 427 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 CCNG1P51959 295 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 PHEXP78562 749 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 TLE3Q04726 772 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 ASPHQ12797 758 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 FAM53BQ14153 422 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 MDC1Q14676 2089 aaKnown RBP18.87■□□□□ 0.61
COL9A3-204ENST00000463487 CASP8Q14790 479 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 HKDC1Q2TB90 917 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 C1orf189Q5VU69 101 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 LIPJQ5W064 366 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 MED27Q6P2C8 311 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 CCDC81Q6ZN84 652 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 TMEM151AQ8N4L1 468 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 BANPQ8N9N5 519 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 ZNF740Q8NDX6 193 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 SREK1Q8WXA9 508 aaKnown RBP18.87■□□□□ 0.61
COL9A3-204ENST00000463487 PGM2Q96G03 612 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 GBP5Q96PP8 586 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 C1QTNF3Q9BXJ4 246 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 GPR87Q9BY21 358 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 DRC3Q9H069 523 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 IFT80Q9P2H3 777 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-204ENST00000463487 COPG2Q9UBF2 871 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 PCTPQ9UKL6 214 aa18.87■□□□□ 0.61
COL9A3-204ENST00000463487 SPTBP11277 2137 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 LCMT2O60294 686 aaKnown RBP18.86■□□□□ 0.61
COL9A3-204ENST00000463487 OTCP00480 354 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 RPS17P08708 135 aaKnown RBP18.86■□□□□ 0.61
COL9A3-204ENST00000463487 SBK3P0C264 359 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 CPA3P15088 417 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 GCGRP47871 477 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 AVPR1BP47901 424 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 PRKAA2P54646 552 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 STXBP1P61764 594 aaKnown RBP18.86■□□□□ 0.61
COL9A3-204ENST00000463487 MC1RQ01726 317 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 DNASE1L3Q13609 305 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 NKAIN1Q4KMZ8 207 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 GRHL2Q6ISB3 625 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 ZNF517Q6ZMY9 492 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-204ENST00000463487 ABHD13Q7L211 337 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 VN1R4Q7Z5H5 301 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 NT5CQ8TCD5 201 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 CT55Q8WUE5 264 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 CCT6BQ92526 530 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 TM4SF19Q96DZ7 209 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 CHST8Q9H2A9 424 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 NOL11Q9H8H0 719 aaKnown RBP18.86■□□□□ 0.61
COL9A3-204ENST00000463487 ADGRE2Q9UHX3 823 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 PLLPQ9Y342 182 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 PCDHGA11Q9Y5H2 935 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 ACTL7BQ9Y614 415 aa18.86■□□□□ 0.61
COL9A3-204ENST00000463487 WDFY3Q8IZQ1 3526 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 LOC101059948A0A1B0GTJ6 334 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 LRRC14BA6NHZ5 514 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 P2RX6O15547 441 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 DLX3O60479 287 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 WFS1O76024 890 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 SUPT7LO94864 414 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 CLDN9O95484 217 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 MLYCDO95822 493 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 SERPINA6P08185 405 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 RAB40ALP0C0E4 278 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 LIFP15018 202 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 EPORP19235 508 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 IMPDH1P20839 514 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 CYP4F2P78329 520 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 E2F2Q14209 437 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 HERC3Q15034 1050 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 RBBP7Q16576 425 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 ARHGAP40Q5TG30 622 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 HDXQ7Z353 690 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 VASH2Q86V25 355 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.85■□□□□ 0.615e-7■■□□□ 12
COL9A3-204ENST00000463487 FKBP10Q96AY3 582 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 L3HYPDHQ96EM0 354 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 C10orf90Q96M02 699 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 SPNS1Q9H2V7 528 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 ANKHQ9HCJ1 492 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 ZNF304Q9HCX3 659 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 SSU72Q9NP77 194 aaKnown RBP18.85■□□□□ 0.61
COL9A3-204ENST00000463487 EMCNQ9ULC0 261 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 SLC22A7Q9Y694 548 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 FREM2Q5SZK8 3169 aa18.85■□□□□ 0.61
COL9A3-204ENST00000463487 CLEC3AO75596 197 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 FBLP22087 321 aaKnown RBP18.84■□□□□ 0.61
COL9A3-204ENST00000463487 TGM3Q08188 693 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 CFAP157Q5JU67 520 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 ZNF678Q5SXM1 525 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 C10orf62Q5T681 223 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-204ENST00000463487 ZNF385CQ66K41 422 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-204ENST00000463487 TMEM214Q6NUQ4 689 aaKnown RBP18.84■□□□□ 0.61
COL9A3-204ENST00000463487 FAM199XQ6PEV8 388 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-204ENST00000463487 ANKRD53Q8N9V6 530 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 ZNF483Q8TF39 744 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms