RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 ESCO2Q56NI9 601 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 LAIR1Q6GTX8 287 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SYCE2Q6PIF2 218 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PRSS55Q6UWB4 352 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 RSPO2Q6UXX9 243 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 ZNF517Q6ZMY9 492 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CLEC20AQ6ZU45 233 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 NRARPQ7Z6K4 114 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 RAB43Q86YS6 212 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 HID1Q8IV36 788 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SETD9Q8NE22 299 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 RNF139Q8WU17 664 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 TWIST2Q8WVJ9 160 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 TUBGCP3Q96CW5 907 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SMARCD1Q96GM5 515 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PDLIM5Q96HC4 596 aaKnown RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 TEX37Q96LM6 180 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SDHCQ99643 169 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CNPPD1Q9BV87 410 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CSNK1G1Q9HCP0 422 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 C11orf16Q9NQ32 467 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 RAPGEFL1Q9UHV5 662 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 LEF1Q9UJU2 399 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PEX16Q9Y5Y5 336 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CHD9Q3L8U1 2897 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SNTNA6NMZ2 147 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 H3BQ06 376 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CTDSP2O14595 271 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 GNGT2O14610 69 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 AZIN1O14977 448 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 ZNF780AO75290 641 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 UGT2B17O75795 530 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 BEST1O76090 585 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CDK14O94921 469 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 C1RP00736 705 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 FTH1P02794 183 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 RB1P06400 928 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 ITGAMP11215 1152 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CPB1P15086 417 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PRKACGP22612 351 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 MAPK3P27361 379 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CTNNB1P35222 781 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SLC1A2P43004 574 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 MAGEA11P43364 429 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SLC15A1P46059 708 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 MRPL19P49406 292 aaKnown RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 UGT2B15P54855 530 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 DIO3P55073 304 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SLC26A5P58743 744 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 BNC1Q01954 994 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 RAD51Q06609 339 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CNN3Q15417 329 aaKnown RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PCID2Q5JVF3 399 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 ASTLQ6HA08 431 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SLC8B1Q6J4K2 584 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SPESP1Q6UW49 350 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PLEKHM3Q6ZWE6 761 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SPATA2LQ8IUW3 424 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 FBXL6Q8N531 539 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 C2CD4AQ8NCU7 369 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SETD6Q8TBK2 473 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CREB3L4Q8TEY5 395 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CLEC4CQ8WTT0 213 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CHTF18Q8WVB6 975 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 GTF2H4Q92759 462 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SNAPC3Q92966 411 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PEX13Q92968 403 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 FATE1Q969F0 183 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 PYCR2Q96C36 320 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 NEDD4LQ96PU5 975 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SMOQ99835 787 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 ZPBPQ9BS86 351 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CCDC32Q9BV29 185 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 ITPAQ9BY32 194 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 TUBB1Q9H4B7 451 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CARS2Q9HA77 564 aaKnown RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CCNB1IP1Q9NPC3 277 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 SMPD4Q9NXE4 827 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 CCDC59Q9P031 241 aaKnown RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 TMEFF2Q9UIK5 374 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-203ENST00000463369 TBC1D24Q9ULP9 559 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 AP1M2Q9Y6Q5 423 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 HSPE1-MOB4S4R3N1 261 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 TRANK1O15050 2925 aa8.42□□□□□ -1.06
SHQ1-203ENST00000463369 COL4A4P53420 1690 aaPredicted RBP8.41□□□□□ -1.06
SHQ1-203ENST00000463369 A0A1W2PPL8 197 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 MEIOCA2RUB1 952 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 SMPD2O60906 423 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 VPS4BO75351 444 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 ARHGEF15O94989 841 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 LCKP06239 509 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 CAPN1P07384 714 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 CA3P07451 260 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 CTSAP10619 480 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 GGT1P19440 569 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 NFKB1P19838 968 aa8.41□□□□□ -1.06
SHQ1-203ENST00000463369 ACSL1P33121 698 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 227.3 ms