RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PSMC3IPQ9P2W1 217 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC12-213ENST00000461577 OPTCQ9UBM4 332 aa10.07□□□□□ -0.8
TRAPPC12-213ENST00000461577 ZNF282Q9UDV7 671 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC12-213ENST00000461577 FETUBQ9UGM5 382 aa10.07□□□□□ -0.8
TRAPPC12-213ENST00000461577 NXT1Q9UKK6 140 aaKnown RBP10.07□□□□□ -0.8
TRAPPC12-213ENST00000461577 ANGPTL3Q9Y5C1 460 aa10.07□□□□□ -0.8
TRAPPC12-213ENST00000461577 KCNMB2Q9Y691 235 aa10.07□□□□□ -0.8
TRAPPC12-213ENST00000461577 SCN3AQ9NY46 2000 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 ARGFXA6NJG6 315 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 K7EPI3 171 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 MAP2K7O14733 419 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 CNOT3O75175 753 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 IGHEP01854 428 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 VARSP26640 1264 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 GCAP28676 217 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 AGTR2P50052 363 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 VSNL1P62760 191 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 KCNAB2Q13303 367 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 LAPTM5Q13571 262 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 PWP1Q13610 501 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 DSG2Q14126 1118 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 SLBPQ14493 270 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 HIST2H2ACQ16777 129 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 PFKFB4Q16877 469 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 XKR6Q5GH73 641 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 TECRLQ5HYJ1 363 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 HIST2H2AA3Q6FI13 130 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 TMEM214Q6NUQ4 689 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 SLCO4C1Q6ZQN7 724 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 PLD6Q8N2A8 252 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 EXD3Q8N9H8 876 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 KCT2Q8NC54 265 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 TRPV3Q8NET8 790 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 TTLQ8NG68 377 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 NT5CQ8TCD5 201 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 STT3BQ8TCJ2 826 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 ADAMTS17Q8TE56 1095 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 UBTD2Q8WUN7 234 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 GPR78Q96P69 363 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 IP6K3Q96PC2 410 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 SPNS1Q9H2V7 528 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 EPB41L4BQ9H329 900 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 ACSS2Q9NR19 701 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 ZNF358Q9NW07 568 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 GEMIN8Q9NWZ8 242 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 TRPC4Q9UBN4 977 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 CTSFQ9UBX1 484 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 ZFP69BQ9UJL9 534 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 TMCO1Q9UM00 188 aa10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 V9GYY5 206 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-213ENST00000461577 ITPR1Q14643 2758 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 FAM208BQ5VWN6 2430 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 URADA6NGE7 173 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 ANKDD1BA6NHY2 528 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 VSTM2BA6NLU5 285 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 H0YIG0 161 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 MKRN2OSH3BPM6 223 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 FFAR3O14843 346 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 GPR42O15529 346 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 FOXS1O43638 330 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 SMIM24O75264 130 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 RFPL1O75677 317 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 NSA2O95478 260 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 UMODP07911 640 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 ZGLP1P0C6A0 271 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 MTHFD2P13995 350 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 IL1RNP18510 177 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 ALDH18A1P54886 795 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 RRADP55042 308 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 FOXL2P58012 376 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 SKP1P63208 163 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 IRF8Q02556 426 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 CHIT1Q13231 466 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 ATP1A4Q13733 1029 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 HERC3Q15034 1050 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 SETDB1Q15047 1291 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 RBBP7Q16576 425 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 PAGE2BQ5JRK9 111 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 TMIGD1Q6UXZ0 262 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 TIFABQ6ZNK6 161 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 SHISA6Q6ZSJ9 500 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 MED25Q71SY5 747 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 ABHD13Q7L211 337 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 APLFQ8IW19 511 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 PRSS58Q8IYP2 241 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 ARHGEF39Q8N4T4 335 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 OR9A4Q8NGU2 314 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 CCT6BQ92526 530 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 MOCOSQ96EN8 888 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 PTCD3Q96EY7 689 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 VPS50Q96JG6 964 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 FER1L6-AS2Q96M78 137 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 SPSB2Q99619 263 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 CRB3Q9BUF7 120 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 PITHD1Q9GZP4 211 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 EHD1Q9H4M9 534 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 NT5DC2Q9H857 520 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 MKKSQ9NPJ1 570 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms